Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00071 ATGGCCAAGATATCACAGAAAAGCCTCAAAGGTACAGACGGCAGTGCCACTACTCCCACGAAACAAGTGAAGCGGACACGCAAAATCATCCCAAGAGACTCTCCTCCACAGCGAAGTTCCATCTACAGAGGTGTCACCAGGCATCGATGGACAGGTCGATATGAGGCTCATTTGTGGGATAAGAACTGCTGGAATGAATCACAGAACAAGAAAGGAAGACAAGGGGCATATGATGATGAAGAAGCGGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTATTGGGGCCAAGACACTCTCCTCAATTTCCCTTTATCAAATTATGAACAAGAGCTCAAAGAGATGGAGGGTCTGTCCAAAGAAGAATATATTGGATCCTTAAGAAGAAAAAGCAGTGGCTTCTCTCGTGGAGTTTCCAAATATAGAGGCGTAGCGAGGCACCACCACAATGGAAGATGGGAAGCTCGAATTGGTAGAGTGTTTGGCAACAAATATCTATACCTTGGAACTTACGCTACACAAGAAGAAGCAGCCAGAGCATATGATATGGCAGCCATAGAGTACCGTGGACTTAACGCCGTTACAAACTTTGATCTCAGCCTCTATATCAAATGGCTACGTCCCAATAATAAAACCCAAGAAAACAGTGCTTACGACCCTGAAGGAAGTCCTATTAATCCTGACCTTCAACTAGGCTTTGTCTCCCCCCAGCTCAGCTCGACCACCAGTGAGACAGCAGTGACTCCCCCACGACCCGGTGGCAGTGGCGGTGGCTCTACTTCATCTGCACTAGGGCTTCTCTTACAGTCATCAAAATTCAAAGACATGCTAGAAAGGACTTCAACAGTTGCTGATTACCCTACAACACCCCCAGAATCAAATCCACCTCGTCGTACCTTCCCTGAAGATATTCAAACATTTTTCGGTTCTGAAGAATCAGACAGCTACACAGAGAGTGATGACATTATATTTGGTGACTTGAGCTCCATTGCTGCACCAATTTTTCATTGCGAGCTTGATGCTTAG 1026 0.462 MAKISQKSLKGTDGSATTPTKQVKRTRKIIPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAARAYDLAALKYWGQDTLLNFPLSNYEQELKEMEGLSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAARAYDMAAIEYRGLNAVTNFDLSLYIKWLRPNNKTQENSAYDPEGSPINPDLQLGFVSPQLSSTTSETAVTPPRPGGSGGGSTSSALGLLLQSSKFKDMLERTSTVADYPTTPPESNPPRRTFPEDIQTFFGSEESDSYTESDDIIFGDLSSIAAPIFHCELDA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00071 341 SMART rav1_2 41 110 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 SMART rav1_2 140 204 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 FunFam AP2-like ethylene-responsive transcription factor 40 106 - -
Bach6g00071 341 CDD AP2 139 200 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 ProSiteProfiles AP2/ERF domain profile. 140 198 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 ProSiteProfiles AP2/ERF domain profile. 41 104 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 SUPERFAMILY DNA-binding domain 139 200 IPR016177 GO:0003677
Bach6g00071 341 Gene3D AP2/ERF domain 41 106 IPR036955 GO:0003700|GO:0006355
Bach6g00071 341 Gene3D AP2/ERF domain 139 200 IPR036955 GO:0003700|GO:0006355
Bach6g00071 341 MobiDBLite consensus disorder prediction 1 24 - -
Bach6g00071 341 FunFam AP2-like ethylene-responsive transcription factor 139 200 - -
Bach6g00071 341 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 226 - -
Bach6g00071 341 Pfam AP2 domain 139 190 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 Pfam AP2 domain 41 96 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 PRINTS Ethylene responsive element binding protein signature 180 200 IPR001471 GO:0003700|GO:0006355
Bach6g00071 341 SUPERFAMILY DNA-binding domain 40 106 IPR016177 GO:0003677
Bach6g00071 341 MobiDBLite consensus disorder prediction 238 261 - -
Bach6g00071 341 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00071 Bach-Chr6 550179 552783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00071 37 202 AP2-EREBP Transcription Factor Family AT5G57390 72.189 2.05e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach6g00071 AP2 2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00071 K09285 - pop:18097139 485.337