Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00070 ATGTCCCTTTCTGCATCATCCATGATGAATGGTTGCCAAAAGTCCTCAATTTCAAGACAGTCATACAATTCTCTCTATGTGAATCCCCTCAATGAGCTCAGGCATAGCCGTAGCTGCAGCGACTATGGTTGCTTAGCCTCCAAAGGCGATAACTTTGAAGATTTCAGGCACCGAGAGTGGATAGTTTTAGCTGATGATAAAGAGAATGCTCCTCTCAGCAATAAAGAAATCGCTGTCTCTGGTAACAAAGAGAACACAAAACCCGTAAATGGGTCTGCTGCTGCGCCCAAACAATTCTCAAAGTTCAAGTCTTTGTCCACAGACAGGATTTTGAAACCTTCCTCTCTTGAGTTCTGTATGCAAATGAACGAGCCCGAGAAGGCTTTTAGGTTGAAGTTATTGGATTCCGCTGAATCGGAGAATTCGAGCTCATTGAATATTTGGGACTACTCGGATTCAGAAGCAGCTCCGGCTTCGTCCTGGTCCACACTGCCTAATAAGTCTTTGATCTGTAGACCATTGCCTATAGATATTGGAAAGTGTACTTGTATTATTGTGAAGGAAACGACACCAGAAGAACTATCCGGGGGCACTATGTTCTCCCTTTATACCTATGAAGGTCAGGGAAGGCAGAATAGAAAACTAGCTGTAGCTCACCACAAGCGGAGAAATGGGAGATCTCAGTTCACCATAGCTCAGAATGTAAAAGGACTGTTAATGTCCAATTCAGATGATAGTTTTCTTGGGACTGTAACAGCTAACCTCATGGGTTCAAAATACAACATATGGAATCAGGGATATCGTTATGACCCCCATAGTCAACAGCCAAAGTCACTTCTTGCCGTTGTAACATATGTACCAACAATAACTACATGTATAGGAAGTTACAGAAGCATGAGGGCTTATATACCCAAGCATCAATCTATGTCATTTTCGCTAAAGAATTCAACTCAGTTGCAGCACGGTAAAGGACTGCCCATGGATTGGGAAGGAAAATTGGACAAAGTTCATCAACTATTCACAAGGGTTCCACTTTACAACAAGATTTCAAAGCAATATGAACTTGACTTTAGAGATAGAGGAAGATCAGGACTAGGAATCCAAAGATCTGTAAAAAATTTCCAGCTGACTCTGGAGGAAAATGGGAGGCAAACAATCCTACAGCTTGGTAAAGTGGGAAAATCGAAGTTTGTTATGGACTACAGATATCCTTTGACAGGTTACCAGGCGTTTTGCATATGTTTGGCTTCTATTGATCCAAAGATTTGCTGCACCGTGTAGTAGAGTGAAATTTTTTTAAAAACACTTAGTTCAATCTCTGAACGGAAAGTGTTTCTTTCCTTTTTGGCCTCCATCCAGAGCGCTATATGTATTGGGGATCACTGTCAAGACAAGCCAAATTAGACCAAACAGTTTCGTGGGTAAAATGTATGTATTGTTGCTCAAAGGAAAAACGATGTTTTTGGAG 1468 0.4142 MSLSASSMMNGCQKSSISRQSYNSLYVNPLNELRHSRSCSDYGCLASKGDNFEDFRHREWIVLADDKENAPLSNKEIAVSGNKENTKPVNGSAAAPKQFSKFKSLSTDRILKPSSLEFCMQMNEPEKAFRLKLLDSAESENSSSLNIWDYSDSEAAPASSWSTLPNKSLICRPLPIDIGKCTCIIVKETTPEELSGGTMFSLYTYEGQGRQNRKLAVAHHKRRNGRSQFTIAQNVKGLLMSNSDDSFLGTVTANLMGSKYNIWNQGYRYDPHSQQPKSLLAVVTYVPTITTCIGSYRSMRAYIPKHQSMSFSLKNSTQLQHGKGLPMDWEGKLDKVHQLFTRVPLYNKISKQYELDFRDRGRSGLGIQRSVKNFQLTLEENGRQTILQLGKVGKSKFVMDYRYPLTGYQAFCICLASIDPKICCTV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00070 426 SUPERFAMILY Tubby C-terminal domain-like 158 425 IPR025659 -
Bach6g00070 426 Pfam Tub family 172 419 IPR000007 -
Bach6g00070 426 PANTHER TUBBY-RELATED 66 422 - -
Bach6g00070 426 Gene3D Tubby Protein; Chain A 166 419 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00070 Bach-Chr6 545879 548794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00070 64 309 TUB Transcription Factor Family AT1G16070 52.756 3.22e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bach6g00070 Tub 9.3e-41 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00070 K19600 - cave:132188154 572.007