Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00039 CGAAACTCGAAAGAGGCTTCTATTTCTCCCGTTACCTTCTCTATCGGCGACTCTATTGCCTTTTCTCCTCTCTTCCGCTCGCTCTTAACTCCCCTTACACCCGCCATTGATTACTCCAATTGCCGAGGCACTTTCTGGCTCATCCTGTATCATGGATGGCATTCATGGGGGTGATTCTCGTATACACATGAGTGATGCGCAACATCCTATTCATGTGCAGTATGTGCAAGAACATGAACATCATGGATTGCACCACATGAGTAACGGAAATGGCATGGAGGAGGATCATAATAATGGCGGTGATAATAATGGTGGAAGTGAGAGCATGGAAGGAGAAGTTCCGTCTAATCCTGGAAATCTCCCCGACAATCATACTACAATGATGGAGGCTGGAGTTGATGGTGGGGACCAGCTAACTTTGTCTTTCCAGGGCCAAGTTTACGTATTTGACTCTGTGTCACCCGGAAAGGTTCAAGCTGTACTATTACTATTGGGGGGGCGTGAAATACCTCCAACTATGCCTACCATCCCAGTAGCCTCTCACCATAATAATCGGGGATTTGCTGGTACTCCACAAAAATTCAGTGTCCCACAGAGATTAGCCTCGTTGATTAGATTTCGTGAGAAGCGGAAAGATCGAAATTTTGACAAAAAAATCCGTTATACTGTTCGTAAAGAGGTAGCTTTGAGGATGCAAAGAAATAAAGGTCAGTTTACCTCTTCCAAGTCAAGTAATGATGATTCTGCATCAGCTGCAACAAACTGGGGGACGAGTGAAAGTTGGTCCTCTGACAATAATGGATCACAACAGCAGGATATCGTTTGTAGGCACTGTGGCATCAGCGAGAAGTGCACACCAATGATGCGACGTGGGCCTGAAGGGCCAAGGACCCTCTGCAATGCATGTGGACTTATGTGGGCAAACAAGGGAACTCTAAGGGACCTATCAAAGGCCGCAGCACCCTTGCCTGTGCCTAATTCTTCGTTAAACAGGAATGAGAACAAAAATTTTGAGGCCAGCCAGATAGTTCTTAGAGTGCCGGGAGATGTTGACGATTCATCATGAGACTTTTTTGTTTGGGTGACCATACAAAGTGATTCCATGGAAGAAAAGTGATAAGGGAGTGCTTGCCTCTAGATGAGTATTATAAGGGCGGATTTACTGTGTTTATGTGAAAATGCTGACATTGACATTCTGTATTTAATATAACTTTATTTATATTAGCAAATGTCCTGTACTCTTGCTCTGTAACATACAGCTAAGTCTCTGGCGATCAAATCTGCTTTCTCATGCAGTAGTCAGCTGTTTTAGCCACGAGTGATTATTACAATTTCCTTTTTCATCTGCTGAGACTTGAGACTGGCGAGTTTAATTGTTGATGCCTTTGTTCC 1392 0.4418 MDGIHGGDSRIHMSDAQHPIHVQYVQEHEHHGLHHMSNGNGMEEDHNNGGDNNGGSESMEGEVPSNPGNLPDNHTTMMEAGVDGGDQLTLSFQGQVYVFDSVSPGKVQAVLLLLGGREIPPTMPTIPVASHHNNRGFAGTPQKFSVPQRLASLIRFREKRKDRNFDKKIRYTVRKEVALRMQRNKGQFTSSKSSNDDSASAATNWGTSESWSSDNNGSQQQDIVCRHCGISEKCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAAPLPVPNSSLNRNENKNFEASQIVLRVPGDVDDSS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00039 304 CDD ZnF_GATA 224 267 IPR000679 GO:0006355|GO:0043565
Bach6g00039 304 ProSiteProfiles CCT domain profile. 149 191 IPR010402 GO:0005515
Bach6g00039 304 PANTHER GATA TRANSCRIPTION FACTOR 28 22 284 IPR045280 GO:0006355
Bach6g00039 304 ProSiteProfiles Tify domain profile. 81 116 IPR010399 -
Bach6g00039 304 ProSitePatterns GATA-type zinc finger domain. 225 252 IPR000679 GO:0006355|GO:0043565
Bach6g00039 304 MobiDBLite consensus disorder prediction 42 73 - -
Bach6g00039 304 Pfam GATA zinc finger 225 261 IPR000679 GO:0006355|GO:0043565
Bach6g00039 304 MobiDBLite consensus disorder prediction 28 80 - -
Bach6g00039 304 ProSiteProfiles GATA-type zinc finger domain profile. 219 267 IPR000679 GO:0006355|GO:0043565
Bach6g00039 304 Pfam tify domain 86 115 IPR010399 -
Bach6g00039 304 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 220 274 - -
Bach6g00039 304 Pfam CCT motif 149 191 IPR010402 GO:0005515
Bach6g00039 304 SMART GATA_3 219 272 IPR000679 GO:0006355|GO:0043565
Bach6g00039 304 Gene3D - 215 278 IPR013088 GO:0006355|GO:0008270
Bach6g00039 304 MobiDBLite consensus disorder prediction 184 218 - -
Bach6g00039 304 SMART tify_2 81 116 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00039 Bach-Chr6 319374 324893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00039 1 303 Tify Gene Family AT1G51600 61.111 5.78e-136 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach6g00039 CCT 1.3e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00039 - - pvu:PHAVU_008G254600g 481.87