Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g02055 ATGTCGGAGAAGAATAGCAAGAAACCACTCAGCCTCAACGACAGCCATTATCGATTCCTCCAAGATCTTTCTGCTCCGTCTAAATGCTCTTTCAATCCGTCTGAGAACGAAGAAAATCCATCGAAGGTCATGCTTGAAGGCCGACGGCGCCTGTGCAAAGCTTCGTCGAAGGACAACAATCGCGAAGAAGATGATAATATTCCTCAATTTTCTGCCATTACTGACTTCGACTCTCCTATCGACCAAGGTTCATCGGAAGGAGAAAAGCGGATCAAGTGGGATGGGCGATGCCGACTCAGCAAAGTTTCGCCGTCGGAAAACGGTGAAGTACAACGGGATAATGTATCCCAGTTGTCGAGACTGACCGACTTTGATTCTTTCTCTAAAGAGGAAAAGAAGACGAAGGTAAAACTGGAAGGGCGACGCCGCCTCTGTAAAGTTTCATATACAGAAGGCGGTAATGTTGATAAAACGCTGGATTTTGATCAACCAAAGTTTATTGAACTTGAGGATTTTGATTCACCGCCTTTACCACCAAAAAATCTTATCCAAATTGAGAAGAGTGGGGGTGGGAATGAAATTAGGGATATTTTAAATGAGTTGAGCTCGAAGTTTGAGTATCTGTCGATTGAGAGGAAGAGGGTACCAAAGTCAGTGCAGGTGGATGAAAACTCTTCAGCTTTTGAAAGGGGAAAAGAAACTGGTCAAGGTAAGGTAATTGATTATGCGAGTGCAGAGTCTTCATTTTTATCACAAGGGGAATCCTATGATAACTCCTGGGATGCAACTAAGAATTCTGGTGTTGGTATTGAGAATGTAGAAGATGATTCGGATGATTCTATTCAAGTTTTGGATAATTTTGATTATGAGGAGGATAGTTCTATAACTTTGAGTAGCCCAAATTCTACATATAAGTTGCCAGGAAAAATGGCAAAAATGTTGTATCCACATCAGAGGGATGGATTGAGGTGGCTTTGGTCTTTGCATTGTCAGGGTAAAGGTGGAATCTTGGGAGATGACATGGGTTTGGGAAAAACAATGCAAATTTGTGGCTTTCTAGCTGGGTTATTCCATTCACATTTAATTAAAAGGGCGTTGGTAGTGGCTCCAAAAACATTATTGCCCCATTGGATCAAAGAATTATCAGCTGTTGGCCTCTCTGAGAAGATAAGAGAATACTATGGAACATCAACAAAATCCCGAGAATATGAACTTAATTACATACTTCAGGATAAAGGGGTTCTTCTGACAACTTATGATATTGTCCGGAACAATTCTAAATCCTTACGTGGGAATTATTCTTTGCATGACGAGGAAAGCGAGGACAGTGCCACATGGGATTATATGATACTTGATGAAGGGCATCTTATAAAGAACCCAAGCACGCAGAGAGCTAGAAGTTTGCTAGAGATCCCAAGTGCCCATCGCATTATCATTAGTGGAACTCCATTGCAAAATAATCTTAAGGAGTTGTGGGCCTTGTTCAATTTCTGTTGTCCTGAGTTGCTTGGTGACAAAAAATGGTTTAAAGAAAGATTTGAGTCAGCCATACTTCGCGGAAATGACAAAAATGCTTCAGAGAGAGAGAAGCGTATTGGTTCTTCTGTTGCAAAGGAGCTAAGAGATTGTATCCAGCCTTACTTTTTGAGACGTTTGAAGAGTGAGGTTTTCAGCCAAGATGACAATAAAAGAACAGAAAAACTTTCTCAGAAACAAGAGATCATTGTTTGGCTTCGACTGACCAGTGTTCAGCGTCATCTTTACGAAGCATTTCTGAAGAGTGAGATTGTACTCTCAGCATTTGATGGCTCGCCACTAGCTGCACTTACGATTTTAAAGAAAATATGTGATCATCCTCTCCTGTTGACAAAGCGAGCGGCCGAAGATGTGTTGGAAGGGATGGACTCAATGCTAAAGCCAGAAGAGGTTAATGTTGCAGAAAAATTGGCGATGCACATAGCAGATGTTGCTGACGCAGATAGGTTTGCGGAAGAACATGATGTATCCTGCAAGATATCTTTCATACTGTCACTATTGGATAATCTGGTTCCAGAAGGGCATCGTGTTCTTATCTTCTCTCAGACACGCAAGATGCTTAATCTTATTCAGGAATCACTAGTAGCCAAAGGTTATGCATTTTTACGAATTGATGGTACAACGAAAGCCAGTGAAAGGATAAGGATTGTTAATGATTTCCAAGACGGTGTTGGAGCTCCCATATTTCTGTTGACAACTCAAGTTGGGGGTTTAGGACTGACACTTACAAGAGCTGATCGCGTGATTGTGGTTGATCCGGCTTGGAACCCGAGTACGGATAACCAAAGTGTTGATCGTGCATATCGGATTGGTCAGAAGAAAGATGTGCTTGTGTACAGGCTAATGACGTGTGGTACTGTTGAAGAAAAGATCTACAGGAAGCAGGTATATAAGGGTGGCTTATTTAGAAGTGCGACTGAGCATAAAGAGCAAATTCGGTACTTTAGCCAGCAGGATCTCAGAGAGCTTTTCAGCCTCCCAAAAGAGGGATTTGATGTATCTGTTACTCAGCAGCAATTAGAGGAAGAACATGGTCGCCAACATACAGTGGATGGCTTTTTTCAAGCACACATTGATTTTCTGAAAAGTCAAGGCATTGCTGGGGTTAGTCACCACAGTTTACTTTTTTCTAAGACAGCACCAGTTCAAACTGGACCTGAGCATGAAGTGACAAGCATGAATCAAGGGACTAAATATGTTGAAACTGCAGCATGTGCTTCTTTTGAAGATATTGCCAATGGAGCTGAGCTAGCATTTAATCCAAAGGATATCAAATTGAGCAAAAAGTGTTCTCCTAGCAGTGTTGGTAAATTGACAGAGTCAGAAATAAGGGATGGAATTAAACGGCTTTCTCAAACTCTAACAAATAAGGCAATGATTTCTAGATTACCTGATGCGGGCGAGAAAATACAGAAGCGGATTGCTGAACTAAATTCAGAGCTTCACAAATTGAAGATGACAGAAAGAACAAAAGTTGATTTGGATGATATAACTGGGGAATTTCAAAGAGTACTGAATGTATAG 3060 0.4127 MSEKNSKKPLSLNDSHYRFLQDLSAPSKCSFNPSENEENPSKVMLEGRRRLCKASSKDNNREEDDNIPQFSAITDFDSPIDQGSSEGEKRIKWDGRCRLSKVSPSENGEVQRDNVSQLSRLTDFDSFSKEEKKTKVKLEGRRRLCKVSYTEGGNVDKTLDFDQPKFIELEDFDSPPLPPKNLIQIEKSGGGNEIRDILNELSSKFEYLSIERKRVPKSVQVDENSSAFERGKETGQGKVIDYASAESSFLSQGESYDNSWDATKNSGVGIENVEDDSDDSIQVLDNFDYEEDSSITLSSPNSTYKLPGKMAKMLYPHQRDGLRWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSHLIKRALVVAPKTLLPHWIKELSAVGLSEKIREYYGTSTKSREYELNYILQDKGVLLTTYDIVRNNSKSLRGNYSLHDEESEDSATWDYMILDEGHLIKNPSTQRARSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCPELLGDKKWFKERFESAILRGNDKNASEREKRIGSSVAKELRDCIQPYFLRRLKSEVFSQDDNKRTEKLSQKQEIIVWLRLTSVQRHLYEAFLKSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSMLKPEEVNVAEKLAMHIADVADADRFAEEHDVSCKISFILSLLDNLVPEGHRVLIFSQTRKMLNLIQESLVAKGYAFLRIDGTTKASERIRIVNDFQDGVGAPIFLLTTQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFRSATEHKEQIRYFSQQDLRELFSLPKEGFDVSVTQQQLEEEHGRQHTVDGFFQAHIDFLKSQGIAGVSHHSLLFSKTAPVQTGPEHEVTSMNQGTKYVETAACASFEDIANGAELAFNPKDIKLSKKCSPSSVGKLTESEIRDGIKRLSQTLTNKAMISRLPDAGEKIQKRIAELNSELHKLKMTERTKVDLDDITGEFQRVLNV 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g02055 1019 FunFam Protein CHROMATIN REMODELING 24 293 571 - -
Bach5g02055 1019 CDD SF2_C_SNF 664 794 - -
Bach5g02055 1019 MobiDBLite consensus disorder prediction 25 39 - -
Bach5g02055 1019 Gene3D - 574 868 IPR027417 -
Bach5g02055 1019 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 326 501 IPR014001 -
Bach5g02055 1019 Gene3D - 289 573 IPR038718 -
Bach5g02055 1019 Pfam SNF2-related domain 317 621 IPR000330 GO:0005524|GO:0140658
Bach5g02055 1019 Pfam Helicase conserved C-terminal domain 671 783 IPR001650 -
Bach5g02055 1019 SMART helicmild6 700 783 IPR001650 -
Bach5g02055 1019 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 674 833 IPR001650 -
Bach5g02055 1019 Coils Coil 979 999 - -
Bach5g02055 1019 MobiDBLite consensus disorder prediction 25 89 - -
Bach5g02055 1019 PANTHER SNF2/RAD54 FAMILY MEMBER 36 997 - -
Bach5g02055 1019 SMART ultradead3 309 512 IPR014001 -
Bach5g02055 1019 MobiDBLite consensus disorder prediction 41 65 - -
Bach5g02055 1019 CDD DEXHc_ERCC6L 314 551 - -
Bach5g02055 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 567 842 IPR027417 -
Bach5g02055 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 300 551 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g02055 Bach-Chr5 29699035 29708867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g02055 279 837 RAD5 or RAD16-like Gene Family AT1G02670 23.415 1.31e-37 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach5g02055 SNF2_N 5e-51 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g02055 K20093 - gmx:100779283 1370.53