Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g02053 ATGGAAGATGAGGGCAATAGCAATTTGCCAAATGGGCTGAGCACAGGAAGCCCTGAAAGTCCATGCTTAAAGAACAATAACAATAACAGCAGCAGCAGCAATAGCCACAACAAAGAACAAGATCGCTTCCTCCCTATAGCAAATGTGGGTAGAATCATGAAAAAAATGCTTCCTGGCAATGGGAAAATCTCAAAGGATGCAAAAGAGACTGTTCAAGAATGTGTATCAGAGTTCATCAGCTTTGTTACTGGGGAAGCATCTGACAAATGTCAAAGAGAGAAGAGGAAGACTATCAATGGGGATGATATCTTATGGGCGATCACCACCTTAGGCTTTGAGGACTATGTGGAGCCACTCAAAACATACCTTCAAAAATACAGAGAGATAGAAGGAGAGAAGCTTAATATTCCAAAGCAACAACGTTCTGAACAAAGGCTGCATCCACATCATCAACAACAACATCCTCACCATCAAGACCAAAATAATAACAATAATCTACCCTTAAATTCTGTATATTCTTCAGCAAATCTCATTTCTCAACCCCCCTATGTGCCCACGGATCAGCCATTTTCCTTACCATTCTCCCCAAATTCAATCCAGAAACAGTTACAGCCGCAAGATCAGGTCGATTCGGTGGGGCATTGGTAA 648 0.4182 MEDEGNSNLPNGLSTGSPESPCLKNNNNNSSSSNSHNKEQDRFLPIANVGRIMKKMLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDILWAITTLGFEDYVEPLKTYLQKYREIEGEKLNIPKQQRSEQRLHPHHQQQHPHHQDQNNNNNLPLNSVYSSANLISQPPYVPTDQPFSLPFSPNSIQKQLQPQDQVDSVGHW 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g02053 215 Gene3D Histone, subunit A 30 167 IPR009072 GO:0046982
Bach5g02053 215 MobiDBLite consensus disorder prediction 139 215 - -
Bach5g02053 215 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Bach5g02053 215 MobiDBLite consensus disorder prediction 139 156 - -
Bach5g02053 215 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 164 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach5g02053 215 ProSitePatterns NF-YB/HAP3 subunit signature. 74 90 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach5g02053 215 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Bach5g02053 215 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Bach5g02053 215 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Bach5g02053 215 MobiDBLite consensus disorder prediction 157 209 - -
Bach5g02053 215 MobiDBLite consensus disorder prediction 1 41 - -
Bach5g02053 215 FunFam Nuclear transcription factor Y subunit B-3 32 159 - -
Bach5g02053 215 SUPERFAMILY Histone-fold 40 158 IPR009072 GO:0046982
Bach5g02053 215 MobiDBLite consensus disorder prediction 7 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g02053 Bach-Chr5 29682242 29682889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g02053 12 215 CCAAT-HAP3 Transcription Factor Family AT2G13570 61.574 2.32e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach5g02053 CBFD_NFYB_HMF 7.3e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g02053 K08065 - gmx:100778216 322.013