Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g02030 ATGGCTCCTGCCACCTCGGCGGCAGCGGCTCAGAGGCTCATCGGCTTCAGTCGCCGCACACAGGCCCCGCGCCGCCCGTCGCCGTCGGCCTCTCCGCCTCCGAAGAAGTATAAGTCGTTAACCGAGATAATGGCGAAAGCCCGCTTTGCTGTCATTGAGCGGGAGGATTACAGCGACGCAATTTGTGAGCAATGCGGGTCCGGTGAACAACAAGACGAGCTGCTCCTATGTGACAAATGTGATAAAGGCTTCCATATGAAATGCCTGAGACCCATTGTGGTCAGAATCCCCATTGGATCATGGCTTTGCCCTAAATGCTTGGGAGAGAGAAGAGTAAGAAGTAGGGATTTTGCTTTGTTTTCTTTTTTGCTGTTGCTGGAAATGTGTCTGTTCTGCCTTTTGCAATGCTTTTCTTTTCTTGATTTAACTTTCGGGGCCCTAGATGCCAAGAAGCGTCGGAGACATTCCGGATCACTGGTACTGCAAAAGAAAAGGAGGAGATTATTACCATTTGTTCCAACAGAAGATGCTGCGCAAAGAATGAAACAGATGCGTTCTCTTGCATCTGCTTTAACAACATTGAATATGGAATTCAGTAATGATCTCACATACTCACCTATGATGGCTCCTAGAGCTGCTAATCAAGCAAAGTTTGAAAATGGTGGCATGCAGGTTCTTTCTAGGGAAGATAACGAAACTTTGGAATACTGCAGAGCCATGTGTAGAAGAGGCGAATGCCCTCCCCTTTTAGTTGTCTTTGATTCATGTGAAGGCTATACTGTAGAGGCAGATGGCCCGATAAAGGATATGACATTTCTTGCTGAGTACATTGGCGATGTGGATTACCTTAAGAACCGAGAAAACGATGATTGTGACAGTTTGATGACCCTTCTTCTTGCAACAGATCCTTCCAAAAGTCTTGTCATCTGCCCTGATAAACGTGGAAACGTTGCTCGCTTTATTAATGGCATAAACAATCATACTCAGGAAGGTAGGAAGAAGCAGAACTGTAAATGCGTGAGATACAGTGTTAATGGTGAATGCAGGGTCTTTTTGGTTGCTACACGTGATATTTCCAAGGGGGAGAGACTGTATTATGATTACAACGGATATGAGCATGAATACCCCACTCATCATTTTATCTAA 1146 0.4555 MAPATSAAAAQRLIGFSRRTQAPRRPSPSASPPPKKYKSLTEIMAKARFAVIEREDYSDAICEQCGSGEQQDELLLCDKCDKGFHMKCLRPIVVRIPIGSWLCPKCLGERRVRSRDFALFSFLLLLEMCLFCLLQCFSFLDLTFGALDAKKRRRHSGSLVLQKKRRRLLPFVPTEDAAQRMKQMRSLASALTTLNMEFSNDLTYSPMMAPRAANQAKFENGGMQVLSREDNETLEYCRAMCRRGECPPLLVVFDSCEGYTVEADGPIKDMTFLAEYIGDVDYLKNRENDDCDSLMTLLLATDPSKSLVICPDKRGNVARFINGINNHTQEGRKKQNCKCVRYSVNGECRVFLVATRDISKGERLYYDYNGYEHEYPTHHFI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g02030 381 ProSitePatterns Zinc finger PHD-type signature. 62 106 IPR019786 -
Bach5g02030 381 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 117 IPR013083 -
Bach5g02030 381 ProSiteProfiles SET domain profile. 247 369 IPR001214 GO:0005515
Bach5g02030 381 SMART set_7 247 375 IPR001214 GO:0005515
Bach5g02030 381 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 151 379 - -
Bach5g02030 381 CDD SET_ATXR5_6-like 244 381 - -
Bach5g02030 381 FunFam Histone-lysine N-methyltransferase ATXR5 152 381 - -
Bach5g02030 381 SUPERFAMILY SET domain 236 369 IPR046341 -
Bach5g02030 381 SUPERFAMILY FYVE/PHD zinc finger 26 108 IPR011011 -
Bach5g02030 381 MobiDBLite consensus disorder prediction 1 36 - -
Bach5g02030 381 Pfam PHD-finger 61 107 IPR019787 -
Bach5g02030 381 ProSiteProfiles Zinc finger PHD-type profile. 59 109 IPR019787 -
Bach5g02030 381 Pfam SET domain 274 369 IPR001214 GO:0005515
Bach5g02030 381 Gene3D SET domain 152 381 IPR046341 -
Bach5g02030 381 CDD PHD_RSF1 62 106 - -
Bach5g02030 381 SMART PHD_3 61 107 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g02030 Bach-Chr5 29413755 29417705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g02030 57 125 C2H2 Transcription Factor Family AT3G01460 39.130 6.36e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach5g02030 SET 1.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g02030 K24406 - qsa:O6P43_023354 575.859