Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g02024 ATGTATGCTTCTAGTTCTACTCCCTCTGTTGCACAACTCTTCCAGGATCTTCTTGGGGACTTCCACTCAAGGAGATTACTCTTACACACCTCACTTAACCAATCACCCAACTCAGCCAATCCCCCAGCTTCCACAAACAGCTATAACTCCACAGAGTCATATGTAGGTGATGGCAGTTTTGATGCAAATGTTGTTATGGTACTATCGGTGCTACTCTGTGCTCTAATTTGCTCACTGGGGTTGAATTCCATCATAAGGTGCGCATTGAGGTGTTCCAATTTTGTGCCACATGACTCTGAGAGTAATCCTCCTGCTCGATTGGCCAACACAGGAATCAAGAAAAAAGCTCTCAAGACTTTCCCCACAGTAAACTATTCCCCAGAGTTGAAACTTCCGGGCTTGGACACAGAGTGTGTCATATGCCTATCAGACTTCACCAATGGAGATCATGTGCGCATTTTGCCAAAGTGCAACCATGGCTTCCATGTCCGCTGCATTGACAAATGGCTAAATTCACATTCTTCATGCCCTAAATGCAGACAGTGCCTAATTGAGACCTGCCAAAAGATTGTTGGCAGCAGCCAGGCTACCTCAACTCAACCACCTGCGCAGCCAGTACCATTACCAGAAACCATCTTAAGGATTGCGCCACTAGAACCTGAAGCTCCGTTCCCCAACTACAGGGAAGTCAGCTAA 696 0.4655 MYASSSTPSVAQLFQDLLGDFHSRRLLLHTSLNQSPNSANPPASTNSYNSTESYVGDGSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVPHDSESNPPARLANTGIKKKALKTFPTVNYSPELKLPGLDTECVICLSDFTNGDHVRILPKCNHGFHVRCIDKWLNSHSSCPKCRQCLIETCQKIVGSSQATSTQPPAQPVPLPETILRIAPLEPEAPFPNYREVS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g02024 231 FunFam RING-H2 finger protein ATL73 97 185 - -
Bach5g02024 231 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Bach5g02024 231 Pfam Ring finger domain 137 180 IPR001841 -
Bach5g02024 231 CDD RING-H2_EL5-like 137 180 - -
Bach5g02024 231 SMART ring_2 138 179 IPR001841 -
Bach5g02024 231 SUPERFAMILY RING/U-box 116 185 - -
Bach5g02024 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 184 IPR013083 -
Bach5g02024 231 PANTHER RING-H2 FINGER PROTEIN ATL78 16 221 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g02024 Bach-Chr5 29310979 29311674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g02024 25 184 C3H Transcription Factor Family AT3G10910 48.214 1.35e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g02024 K19040 - qsa:O6P43_023336 356.681