Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g02010 ATGGGACCGCTTTTTCCAAGAAATCTTTCCCTCTTCTCGCCTCATTCCTCATCGCCTGCCCGTGCATTTCTTCTTCAAATTTCTCACTTTTCAGGTTCTTCGAATCACCCATCACAATTTCCATATTCCTCGAGACGTCAGGACGAGGAGTCACGGAACGTGCGGGTTGCTGTCTGGTGGGATTTTGAGAATTGCCATTTGCCTGCTGGTGTTAATATTTTCAAAATCGCCCATGCCATAACTGAAGCTGTCAGGGCTAATGGGATTAAGGGTCCCATTCAAATAACGGCTTTTGGTGATGTTTTGCAGCTTTCAAGGGCGAATCAGGAGGCCATGTCTTCGACTGGGATTAATCTCACCCACATTCCCAACGGTGGAAAGAATAGTGCTGATAGATCTCTTCTAGTTGATCTTATGTATTGGGTTTCCCAAAATCCTCCACCAGCACATCTGTTTCTGATTTCTGGTGATAGAGACTTTGCTGGCATCTTGCACCGCTTGAGAATGAGTAACTACAATATCTTGCTTGCAAGTCCGGAAAGTGCTTCTAACGTTCTCTGCAGTGCTGCAACTATAATGTGGCACTGGAGTTCATTGCTTAAAGGAGAAAATCTTTCTGGGAAACGATACAATCATCCTCCTGATGGTCCCTATGGATCTTGGTATGGTTACCATAAGGTGCCTCTTGAAAACCCCTTCTTGGCCAGTGAGCAATCTACATTTTCAAAAAGTGAGGAGACATCCGAAACTATGACTGACTTAAAGTTGCGTCCAGTTCCAAAGGCCACTGTGAAGCAGATTCAGAAGATATTAAATTCATATCCAAAAGGGCTCTCCATGTCAGATCTTCGATTGGAGCTGGCAAAAACTGATGTTAGCATAGACAAAGACTACTATGGATATAGAAAGTTCTCTCGCCTTCTTTTATCAATGCCACACATTGTGCAGATTCGCCCTGGAGCTGATGGCCATTTTTTTGTACGTAGTGTCTCTCAAAAATGTCCTGAAACTATTGATTGCAGTGTTGTACCATCAACAACATCTGTTGTCAATAGTAGGGAGTGGGACCTTCTAGCAAAGGTAAATAGTGAGGGGAAAAAAATGACCCAAGATGCAGATGGGATGCCAGCAATGATCCCATATCATGAATGTAGTGGGGAAGATATTCCACAAAAGGTTGAACAACCTGCATTGCAAGAAAAATCCATTGGTGGAGTAGATATTCCTCAAAAGGTTGAACAACCCACTTTGCAAGGAAAATCCATTGGAGAATCTGTGGATGGTACATCATTGTTTCCTCCATCCTCTGAAATACATGTATGTCAGTTGCCAAATGAGGTGCAGCATCCATTGCCAGATCTTGAGAAGGCTGTGGATGTAGCTAATACTCACGTGACTGAGAATCAGTTCCCATCCATTGAGAAAGAGATGTCCAAAACTAAGGTGGGTTTCTTAAAAAAGACATGGAGGAAGTTTTTTGGTAATGAAATTCTTGGCTCTGAGAATGTGACTCCAAATATTCTAGGAAAAGATATTGGATCAGGTGATTGCACTGCCGAGCAAAGTAATGGAACGATAGAAAAGAATGGTTTTTCCAGTGATAGAACTAACAAGTCTGAAGCTGAAGACAAATATGAGAAACCAACTAAAAAGGAGGCTGATGCAGAATGTCAAATTCCTAATTCTTCACCTATTGATGAATCTGTGGTTAAGAAAAAAGCTAGTGAAAGTTCTGAAATTCACAGTGATAATTCTAAAGAAACTCAAAGTTTCTTTAGTTGGATTGGAAGTCGGTGGCCATTCCGGAAGTGGGGTAGAAAGAGTGATGAATTGACAACTAATCAGATCAAAATGATTGGTCTCTCTGAAGAACCTGAGTTACCAGAACGGAACCAGGCAGTTAGTCATTTTCAAAAGCCTGAGTTATTTTCTAGTAGTTCCTTTTGGAGTGACATGGAATCTTTTCTTTTTACTTCCAAAGGATCAGTTCTTGTCTCCCAGTCGAAAAGCAGGGAGGATATGGCACGAAATTTACAAAAGGATGGACCCCTATCACTTGGATCTCTTGGTGAAAATGATCTCCTTCAACTGGTGAATTTGTTAATTTCAGAGAAAAAATGGTTGGAAGAATGCCCTTCTCAAACTTTGCCTTTCAGACTGGCTCAACCAGTTGGAAGGAGCTCGTTATTAGGCCAATCTCATGGTGCAAATGGCTTGAGATCTATCTTTCTAAGCAGTACATCACAGGCCAACTCGCAAAAATTATCAGACGATAATGTGGGGAAACGAAATCAGAGTATTCGCCATACAGAAGTTCTTCCAAGTGCCAGTAAAAGGAAGCATACTGAAAGGTCTAAACCTGATATATTAGCTGATTGTCAGAAACTTGTGAATGAGATATTGAGGAAACATCCAGAGGGATTTAATATGGGCTGTTTTCGGAAACTTTTCCTTCAAACATATGGCTATCCCCTTGATATTCAGAAGCTTGGTCATCAAAAGTTGATATCCTTATTACAGACAATGCCTGGAGTGAAAATAGAGTCCAGTCATATCATTCCTTCTGATCATGCCGTATGTGATTCTGAACCAGAAACTCCCATACTCAATACTAGGGAAACTAATCCTACTCTTTCAGGGTCCAATTCAGATAGCGAACTGTCTGATTCAGCCAAAAAATATGATAACACTGACTCCGCATGGGAAGAATTAGGTCCTGTTTCTGTCAACAATTTCGACAAGATTGATGTGGAACCAAAGTTAAACATGAAAACTCTAAAACTGAAGACGGCAAAGGCTCCTAACTATGAGCCTTGTCTCTCTGATGATGATTTGTCTGAATCTGAAGAAGATCCTTCGAGTTTTACCCAATCAGAAAGGCAGGGGAAGCCAAAAACTGATGAGAAAGACAGTAGTTTATTGCAAATTCTGGATTCATGGTACAGCAGTAGGGAAGGAGAGGATAAAGCAAAGAAATTGGACAATTTTAATTCCACATGTGATGATCTGACAGATATTTTAAATCCATCCAGTCCAGGAATTCATCGTGACACTTGTGCAGGGGATGTCAAGCGAAAGCGCAAACTTCAAAAGAGCTATTCTTTTGTTTCTGATACAGGCTTACATGGGAAGGACAGACTAGTTGATGGGGTCATTGATGGCTCGAAGAGATCAAATGAGTTGAAGATACAAAATTAA 3198 0.4103 MGPLFPRNLSLFSPHSSSPARAFLLQISHFSGSSNHPSQFPYSSRRQDEESRNVRVAVWWDFENCHLPAGVNIFKIAHAITEAVRANGIKGPIQITAFGDVLQLSRANQEAMSSTGINLTHIPNGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFAGILHRLRMSNYNILLASPESASNVLCSAATIMWHWSSLLKGENLSGKRYNHPPDGPYGSWYGYHKVPLENPFLASEQSTFSKSEETSETMTDLKLRPVPKATVKQIQKILNSYPKGLSMSDLRLELAKTDVSIDKDYYGYRKFSRLLLSMPHIVQIRPGADGHFFVRSVSQKCPETIDCSVVPSTTSVVNSREWDLLAKVNSEGKKMTQDADGMPAMIPYHECSGEDIPQKVEQPALQEKSIGGVDIPQKVEQPTLQGKSIGESVDGTSLFPPSSEIHVCQLPNEVQHPLPDLEKAVDVANTHVTENQFPSIEKEMSKTKVGFLKKTWRKFFGNEILGSENVTPNILGKDIGSGDCTAEQSNGTIEKNGFSSDRTNKSEAEDKYEKPTKKEADAECQIPNSSPIDESVVKKKASESSEIHSDNSKETQSFFSWIGSRWPFRKWGRKSDELTTNQIKMIGLSEEPELPERNQAVSHFQKPELFSSSSFWSDMESFLFTSKGSVLVSQSKSREDMARNLQKDGPLSLGSLGENDLLQLVNLLISEKKWLEECPSQTLPFRLAQPVGRSSLLGQSHGANGLRSIFLSSTSQANSQKLSDDNVGKRNQSIRHTEVLPSASKRKHTERSKPDILADCQKLVNEILRKHPEGFNMGCFRKLFLQTYGYPLDIQKLGHQKLISLLQTMPGVKIESSHIIPSDHAVCDSEPETPILNTRETNPTLSGSNSDSELSDSAKKYDNTDSAWEELGPVSVNNFDKIDVEPKLNMKTLKLKTAKAPNYEPCLSDDDLSESEEDPSSFTQSERQGKPKTDEKDSSLLQILDSWYSSREGEDKAKKLDNFNSTCDDLTDILNPSSPGIHRDTCAGDVKRKRKLQKSYSFVSDTGLHGKDRLVDGVIDGSKRSNELKIQN 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g02010 1065 MobiDBLite consensus disorder prediction 953 971 - -
Bach5g02010 1065 Gene3D - 46 198 - -
Bach5g02010 1065 CDD LOTUS 790 847 - -
Bach5g02010 1065 MobiDBLite consensus disorder prediction 936 971 - -
Bach5g02010 1065 Pfam NYN domain 55 191 IPR021139 GO:0004540
Bach5g02010 1065 PANTHER LIMKAIN B LKAP 37 799 IPR024768 GO:0005777|GO:0010468
Bach5g02010 1065 MobiDBLite consensus disorder prediction 518 582 - -
Bach5g02010 1065 MobiDBLite consensus disorder prediction 867 887 - -
Bach5g02010 1065 Gene3D - 261 331 IPR041966 -
Bach5g02010 1065 CDD PIN_limkain_b1_N_like 55 179 - -
Bach5g02010 1065 CDD LOTUS 260 318 - -
Bach5g02010 1065 MobiDBLite consensus disorder prediction 518 532 - -
Bach5g02010 1065 Pfam OST-HTH/LOTUS domain 790 851 IPR025605 -
Bach5g02010 1065 Pfam OST-HTH/LOTUS domain 264 323 IPR025605 -
Bach5g02010 1065 ProSiteProfiles OST-type HTH domain profile. 259 331 IPR025605 -
Bach5g02010 1065 ProSiteProfiles OST-type HTH domain profile. 789 863 IPR025605 -
Bach5g02010 1065 MobiDBLite consensus disorder prediction 533 554 - -
Bach5g02010 1065 MobiDBLite consensus disorder prediction 857 894 - -
Bach5g02010 1065 Gene3D - 784 852 IPR041966 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g02010 Bach-Chr5 29211255 29216101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g02010 54 202 C2H2 Transcription Factor Family AT5G61190 45.638 3.96e-38 152