Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g02006 ATGTGTGTGTTAAAGGGGGCGAATTCTAGAGAAAAAACAAACACAGAGATCAATGAAGAAGACAGAAAAGATTCCATACCAATGTTTCCAGGTTTGAATAGAGATAGAGAAATGTCTGTGATGGTATCTGCTTTGACTCATGTTGTTTGTGGAGATATTCCTAATGATCATAGGCTTCATCATCAACAGGGTGCAACTGAAGAAGTTGATGCTCCAGCAGCTCCGCCTGTTACATTAAACTTCGACCCAGCTTCTCTTTCTGCAACACCATCCTCTTCTTCATCTTATATTCCCACTTATTTTCTCAAGAGAAGTAGGCAAGATGATGATGCATCTTTTTCTGACTTTTCTCATCTGGGTTCATCTCCTGCTGTTACAAGATGTGAGTCTTTGTTTTTGTTAACCCAAATTGATCTATTTCTGTTAAAGGAAACAAAGGAAAGATTTTCATGTTTGATTCAATTTAATACAGTTGAACAAGGTTCAAGCGATTGGAGCAGAAGAATGGGAAATTGCGTATATGAATACAGTAGAGAGAATGCGAGGGAAGGGGAGCAAGAGCAGGAGCAGCCAAGGAGGAAATACAGAGGAGTAAGACAAAGGCCGTGGGGTAAATGGGCAGCAGAAATCAGAGACCCATTCAAGGCAGCAAGAGTGTGGTTAGGCACATTCGAAACAGCTGAAGCAGCCGCCAGAGCATACGACGAAGCGGCCTTGCGTTTTAGAGGCAACAAAGCAAAACTCAATTTCCCTGAAAATGTCAGACTCCGCCAGCAGCAGCATCCTCTTCCGGTCTATGCAGCTCCACCCAACCAATTGAGAATTTCGAATCCTCCCAATACAGTCGTCTCGATTCCAACGTCTACCGAGCCAATCGTCCACACACAAGCACCGCTTCACCATTCACACAGTTCCCAGCATTCTAACAATTTTTATGACTATTCTCAGTTTGCAGAGTTCCCAATGAATTTGTATGATGATGAGATGATTCTATCGACTACTAGTACTTCTTCACTTTATTCTGGGCAGTTTACACCGTCCACGACGGAGACAAGCGGTGGTTCACATTATATACCGTCAGCATCAGTGTCAACATGGTCAGCTTCCGGACATAGCTCCTCTTCTACTGGATAA 1134 0.4321 MCVLKGANSREKTNTEINEEDRKDSIPMFPGLNRDREMSVMVSALTHVVCGDIPNDHRLHHQQGATEEVDAPAAPPVTLNFDPASLSATPSSSSSYIPTYFLKRSRQDDDASFSDFSHLGSSPAVTRCESLFLLTQIDLFLLKETKERFSCLIQFNTVEQGSSDWSRRMGNCVYEYSRENAREGEQEQEQPRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGNKAKLNFPENVRLRQQQHPLPVYAAPPNQLRISNPPNTVVSIPTSTEPIVHTQAPLHHSHSSQHSNNFYDYSQFAEFPMNLYDDEMILSTTSTSSLYSGQFTPSTTETSGGSHYIPSASVSTWSASGHSSSSTG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g02006 377 PRINTS Ethylene responsive element binding protein signature 195 206 IPR001471 GO:0003700|GO:0006355
Bach5g02006 377 PRINTS Ethylene responsive element binding protein signature 217 233 IPR001471 GO:0003700|GO:0006355
Bach5g02006 377 MobiDBLite consensus disorder prediction 1 31 - -
Bach5g02006 377 ProSiteProfiles AP2/ERF domain profile. 194 251 IPR001471 GO:0003700|GO:0006355
Bach5g02006 377 SMART rav1_2 194 257 IPR001471 GO:0003700|GO:0006355
Bach5g02006 377 MobiDBLite consensus disorder prediction 12 30 - -
Bach5g02006 377 Gene3D AP2/ERF domain 193 253 IPR036955 GO:0003700|GO:0006355
Bach5g02006 377 CDD AP2 194 253 IPR001471 GO:0003700|GO:0006355
Bach5g02006 377 PANTHER DNA-BINDING DOMAIN 180 303 IPR044808 GO:0003700|GO:0009873
Bach5g02006 377 FunFam Ethylene-responsive transcription factor 2 193 252 - -
Bach5g02006 377 Pfam AP2 domain 194 243 IPR001471 GO:0003700|GO:0006355
Bach5g02006 377 SUPERFAMILY DNA-binding domain 194 252 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g02006 Bach-Chr5 29126771 29127904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g02006 192 256 AP2-EREBP Transcription Factor Family AT5G61890 86.154 8.02e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach5g02006 AP2 2.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g02006 - - vvo:131639362 242.662