Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01972 ATGGCGAATCACTCAGAGTCTTTGCCTCTAGTCTCTCCACCATCGATCATAGACCCTACAGAGATCGACCTCGAAGCTGGTCCCAGTGAACAAATTCAATGCCGGATTTGTCTCGAAACTGATGGTAGAGATTTCATAGCTCCTTGCAAGTGCAAAGGTACATCAAAATATGTGCATCGAGAATGTTTGGACCACTGGCGGGCTGTTAAGGCAAGGATGCTGTCTCTATCAATTGAAGGGTTTGCATTTGCTCACTGCACAACCTGCAAAGCTCCTTATCATTTACGTGTTCATGTAGCCGCTGATAGGAAATGGCGAACCTTGAAATTTCGGTTCTTTGTCACCAGAGATATTCTGTTTATATTTCTGTCTGTTCAGCTTGTCATTGCTTTGCTGTCTTATTTGGTTTATCTAGTCGATGGTTACCAGCAGCACTGGCTTCGTCTTGTTTGGGGTTTTGACAGTGAGATAAGCTTTTACTACATTTGTGGAGCTCTATTGTTTTTTGCTTTGCTTGGCCTATCTGGTTGCTTCATTACTTGTTATGACCGAAGAGTTCGCAATGATTTGGCCCAGCCTTGTCGAGAATTATGCCTTTGTTGCTGTCAGCCTGGAGTTTGTGCAGACTGTCATTTGCCAGGCACTCTTTGTATGTGGACTGATTGCACCGCATGCTTTGAGAGTTGCGGAACCATGGCAACTGAATGTGGTGGTTGCTTGGGAGGCGCTGGGGAAGCAGGTCTCCCCTTATTATTCATAATGGCTTTGATTGTTCTGGGACTTTTTACTGTAATCGGGATATTCTATAGTGTGTTGGTGGCTACCATGGTAGGACAACGGATATGGCAGCGACATTATCATATACTTGCAAAACGGATGCTTACAAAGGAGTACGTAGTTGAGGATGTTGATGGGGAGGTGACAGGATCTGAGTGGTCTCCCCCGCCTCTCCCAGCTGAGCATGTTCAACAGCTGAAAACACTGGGCCTTATGTGAGTTTTAAGGAGTCATCTACTTGCTGACGAGAGTGGCATGATGTGGAAGCAGACTGGCCCCACGTTTTGCTAGGCTGGTCTTGTAACACAAATCTACAATTATTTTTATAGAATTTCATAACCACAAAATTTGGTTAAATT 1136 0.4463 MANHSESLPLVSPPSIIDPTEIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKARMLSLSIEGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILFIFLSVQLVIALLSYLVYLVDGYQQHWLRLVWGFDSEISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVCADCHLPGTLCMWTDCTACFESCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEVTGSEWSPPPLPAEHVQQLKTLGLM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01972 331 ProSiteProfiles Zinc finger RING-CH-type profile. 26 96 IPR011016 GO:0008270
Bach5g01972 331 Pfam RING-variant domain 34 69 IPR011016 GO:0008270
Bach5g01972 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 104 IPR013083 -
Bach5g01972 331 CDD RING_CH-C4HC3_MARCH 34 90 - -
Bach5g01972 331 SUPERFAMILY RING/U-box 29 94 - -
Bach5g01972 331 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 331 - -
Bach5g01972 331 SMART ringv_2 33 90 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01972 Bach-Chr5 28628016 28632181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01972 1 331 C3H Transcription Factor Family AT2G22120 81.928 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01972 - - gmx:100791777 621.698