Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01971 ATGGCGGCTATCTCTGAGCTCTTCTCACAGCTCTACACCAAGATCATGGTCCTTCTGGTTCTTCTCCTAATCGAACTCGTGCTTCTTATCCGACACTTCAAGTCAGATGCTCGGCCAATCTCTCCCACCCAATTCCTCAAACTCATCGAAGAGAAGAACCCTACGATTCGATTCACCAAGAGATTGAAGCCGGACAACGTAGAGTGCACGGTTTGCTTGTCTGAATTCGAGGAAGGCGAGAAAGTGAGGAACCTGAAATGCAAGCACACGTTTCACAAGGATTGTTTGGATAAGTGGCTGCAGCAGTACTGGGCTACTTGCCCTCTCTGCAGAAACAAATTGCTGCCAGATGATGTTGTGGCGAAGTATCAACAGCTTCAGAATCAGGCAGAAATTGATGGGAATTATGATGATCAGATTACGGTCTTGTTATCTGCATTACGAGGTGGTGGTACTTTCTACCATCACCACTGA 474 0.4684 MAAISELFSQLYTKIMVLLVLLLIELVLLIRHFKSDARPISPTQFLKLIEEKNPTIRFTKRLKPDNVECTVCLSEFEEGEKVRNLKCKHTFHKDCLDKWLQQYWATCPLCRNKLLPDDVVAKYQQLQNQAEIDGNYDDQITVLLSALRGGGTFYHHH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01971 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 116 IPR013083 -
Bach5g01971 157 SUPERFAMILY RING/U-box 50 117 - -
Bach5g01971 157 CDD RING-H2_EL5-like 68 111 - -
Bach5g01971 157 PANTHER - 1 151 - -
Bach5g01971 157 ProSiteProfiles Zinc finger RING-type profile. 69 111 IPR001841 -
Bach5g01971 157 SMART ring_2 69 110 IPR001841 -
Bach5g01971 157 Pfam Ring finger domain 68 111 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01971 Bach-Chr5 28618334 28618807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01971 68 125 C3H Transcription Factor Family AT1G15100 56.897 5.54e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01971 K16282 - gmx:102669811 218.394