Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01957 ATGACGCAGCAGAGTGTGGTGGCGTCTGATCCCAAATCAGGAATCAACATGGCCATCGCCGTTGCCGTATCAAACTCGTCGATATTCACGACGACGGCGCAGAAACCCCCGCCGGCACAAGGAGGGTACATTTCCATTTCAAGGAAGAAGTTTTTAAAGAACCTTGAAATCAATGGGCTCGGTGGAGCAAGAATTAATGCCTGGGTTGAATCAATGAGAGCCTCTTCTCCAACCCATGTCAAATCCAATTCCATTCCTGATGAACATAGCTCTTGGACTGTTCATCGCCCATCTGCATTAGACATGTTCCAGCAAATAATCGATGCTTCGAAAGGAAAGAAAATTGTTGTGTTTCTCGACTATGATGGTACACTGTCACCTATAGTCGATGACCCTGACCGTGCCTTCATGTCCGATGCGATGAGAAAGACAGTGAGAAAACTCGCCAGGTGTTTCCCAACTGCTATAGTAAGCGGCAGATGCAGAGACAAGGTGTACAACTTTGTTCGCCTGGCAGAATTATACTATGCAGGGAGCCATGGAATGGACATTAAAGTCCCAACACGAGCAAAAAACTCCAAACTCAACAAAGATAGCCAAGCAGTTCTTTTTCAACCTGCCAGTGAATTTCTTCCCATGATAGATGAAGTGTACCAACAGTTAGTTGAGAAAACTAAATCAACCCCAGGGGCAATAGTGGAAAATAATAGGTTCTGCGTGTCTGTCCATTTTCGCTGCGTTGATGAGAAGAAATGGAGTGAACTAGCACACCAAGTCAAATCAGTGTTGAAGGAGTACCCGAAGCTTCGTCTCAACCAAGGCAGAAAGGTATTGGAGATTCGCCCCACCATTAAATGGGACAAGGGGAATGCCCTGGAATTTTTATTAGAGTCACTCGGGTTTGCCAATTGCACCGATGTTTGTCCTGTTTACATTGGAGATGATCGAACCGATGAAGATGCATTTAAGAAATTAAGAGACATAGGACAAGGTTTTGGAATTCTTGTCTCCAAATTTCCAAAGGACACCTGTGCATCTTATTCTTTGCAGGAACCCGATGAGGCAAGAACAAATCTGCTACTCTATCTTTTTCTGAACCATCTCATCTCCACAATATTTATTTATTTTATTGTCATTTCATGCAGGTGA 1149 0.4395 MTQQSVVASDPKSGINMAIAVAVSNSSIFTTTAQKPPPAQGGYISISRKKFLKNLEINGLGGARINAWVESMRASSPTHVKSNSIPDEHSSWTVHRPSALDMFQQIIDASKGKKIVVFLDYDGTLSPIVDDPDRAFMSDAMRKTVRKLARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKVPTRAKNSKLNKDSQAVLFQPASEFLPMIDEVYQQLVEKTKSTPGAIVENNRFCVSVHFRCVDEKKWSELAHQVKSVLKEYPKLRLNQGRKVLEIRPTIKWDKGNALEFLLESLGFANCTDVCPVYIGDDRTDEDAFKKLRDIGQGFGILVSKFPKDTCASYSLQEPDEARTNLLLYLFLNHLISTIFIYFIVISCR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01957 382 FunFam Trehalose 6-phosphate phosphatase 115 202 - -
Bach5g01957 382 NCBIfam HAD-IIB family hydrolase 117 328 IPR006379 -
Bach5g01957 382 NCBIfam trehalose-phosphatase 112 354 IPR003337 GO:0003824|GO:0005992
Bach5g01957 382 Gene3D - 196 283 - -
Bach5g01957 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 357 IPR044651 GO:0004805|GO:0005992
Bach5g01957 382 Pfam Trehalose-phosphatase 118 352 IPR003337 GO:0003824|GO:0005992
Bach5g01957 382 Gene3D - 117 349 IPR023214 -
Bach5g01957 382 FunFam Trehalose 6-phosphate phosphatase 213 370 - -
Bach5g01957 382 FunFam Trehalose 6-phosphate phosphatase 207 283 - -
Bach5g01957 382 CDD HAD_TPP 116 356 - -
Bach5g01957 382 SUPERFAMILY HAD-like 116 362 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01957 Bach-Chr5 28411848 28414084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01957 111 325 Trehalose Biosynthesis Gene Families AT1G70290 28.125 8.61e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01957 K01087 - zju:107432017 574.704