Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01955 ATGACTGAAAATTCGACAGAGAGGAGATCTGGCTGTGGGATTCTGAATGCAGTGTTTGGGCGACGCAGTTTATGGGGGAAAAAAACAAGTTCGACAGATTATATTAGCTCCAACAATGGGGGTGATTTTGTCAAGGCACCAAACAACAACATTTCAAAAAGGCGGCGTGGCGGCTCTAACGAGGTCATTGTGTTTGATTCTTCATCATCTTGTTCATCTAATGCCACAAATTCGAAGAGTGGTTCTGCCATCAAGCCTGCAACCAATCCCCATAGGGCAACCCCAAACCCTGTCCAAGTCCAACCCAGAAAGGTTCAGGACGAAGCAGCTAGGACAGGCCCATCAAAAGTGGGACCTAATCAAGGGTATGTTAACCAGGGAAGAAGGGTACCCAAAGAAGCCATTGGCCTCTCCGGAGAACTTGAAAGCATGATCACTGATCACCAGAAAACCATGGGCAGCAGTACCCTTGTCCGGGCTTCATCCGGCAATGTGATGCTCTTTGGCAATTTAGGTAACTTGAGACAAGCTGGAAGAGGAGGAGGAGGAAATACTAATTCTTACAATGTAACGAGTCAGACTCCAAAGGTGAGAGAGGAAAGCCAAGTTGGCAATGGAAGATACACAAACCATGTAGTGGAAAATGGCAATAACAGAAGCAAAGAAGAGAACAGCAAGCAAGAACAATCTGGTTCATTATGCAGGGCATTGTCTACAAGAATGGATCCAGAGCAATTGAAGATATTGGGCAACGAGGATTATAAGAATGGTAGATTTGCTGAGGCATTGGCTCTTTATGATGCAGCAATCTCTATTGACCCCAACAAGGCTTCCTATAGAAGCAACAGAAGTGCAGCATTAACAGCTCTTGGAAGGATTCTCGAGGCTGTGTTTGAGTGCAGAGAAGCTATTCGAATTGAACCAAATTACCTTAGAGCTCATCAACGACTTGGAAATTTGCACCTTAGATTGGGAGAGACAGATAAGGCGCAGTATCATTTAAAACGAGCAGGAGGAGAGGCTGATCCTGATGAAATTGCTAAAGTAAAGATTCTTCAGGCTCATCTAAACAAGTGCACTGAGGCTCGTAGGTTACGAGATTGGAACACTTTGATCAAGGAGACCAATGGGGCAATATCAGCTGCCGCAGACTCTGCTCCACAGATATTTGCTTTGCAAGCCGAAGCACTTCTAAAGCTCCGTAGGCATCAAGATGCTGACGAAGCAATATCAAAAGGTCCTCATTTTGACGACGATGAGTGCATAAAGTTCTTGGGACCTATTGGTTATGCAAGTGTCTTAGTGACAAGGTCTCAGGTTGATATGGCTATTGGCAGATTTGATGAAGCTTTAGAGGCAGCTCAACGAGCAGCTAGGCTTGATCCCAATAATAGGGAAGCAAACATGGTGTTGCGAAGGTCTCGAGCAGTAGCAGCAGCTCGAACAAATGGAAATAAGCTTTTCAAGGCATCCAAATTCTCTGAGGCATGTGCTGCCTATGCAGAGGGCCTTGAACATGATCCTTCTAACTCGGTTTTGCAGTGCAACCGTGCTGCTTGTAGATCAAAATTAGGCCAATACGAGAAAGCTTTGGAAGATTGCACTATGGCCCTTAACCTGCGTCCATCTTACAGCAAGGCCAGATTAAGAAGAGCCGATTGTAATGCAAAGTTGCAAAGATGGGAAGCTTCAATACAAGACTACGAAATCTTATTAAGAGAAACAGCGGAGGATGAGGAAGTGAAGCGGGCCTTGTCGGAGGCCCAAGAACAACTCCAGAAACGGCAAGGTCAAGATGTGTAG 1803 0.4542 MTENSTERRSGCGILNAVFGRRSLWGKKTSSTDYISSNNGGDFVKAPNNNISKRRRGGSNEVIVFDSSSSCSSNATNSKSGSAIKPATNPHRATPNPVQVQPRKVQDEAARTGPSKVGPNQGYVNQGRRVPKEAIGLSGELESMITDHQKTMGSSTLVRASSGNVMLFGNLGNLRQAGRGGGGNTNSYNVTSQTPKVREESQVGNGRYTNHVVENGNNRSKEENSKQEQSGSLCRALSTRMDPEQLKILGNEDYKNGRFAEALALYDAAISIDPNKASYRSNRSAALTALGRILEAVFECREAIRIEPNYLRAHQRLGNLHLRLGETDKAQYHLKRAGGEADPDEIAKVKILQAHLNKCTEARRLRDWNTLIKETNGAISAAADSAPQIFALQAEALLKLRRHQDADEAISKGPHFDDDECIKFLGPIGYASVLVTRSQVDMAIGRFDEALEAAQRAARLDPNNREANMVLRRSRAVAAARTNGNKLFKASKFSEACAAYAEGLEHDPSNSVLQCNRAACRSKLGQYEKALEDCTMALNLRPSYSKARLRRADCNAKLQRWEASIQDYEILLRETAEDEEVKRALSEAQEQLQKRQGQDV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01955 600 SMART tpr_5 387 420 IPR019734 GO:0005515
Bach5g01955 600 SMART tpr_5 243 276 IPR019734 GO:0005515
Bach5g01955 600 SMART tpr_5 431 464 IPR019734 GO:0005515
Bach5g01955 600 SMART tpr_5 511 544 IPR019734 GO:0005515
Bach5g01955 600 SMART tpr_5 545 578 IPR019734 GO:0005515
Bach5g01955 600 SMART tpr_5 311 344 IPR019734 GO:0005515
Bach5g01955 600 SMART tpr_5 477 510 IPR019734 GO:0005515
Bach5g01955 600 SMART tpr_5 277 310 IPR019734 GO:0005515
Bach5g01955 600 MobiDBLite consensus disorder prediction 68 101 - -
Bach5g01955 600 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 4 600 IPR044534 -
Bach5g01955 600 SUPERFAMILY TPR-like 482 595 IPR011990 GO:0005515
Bach5g01955 600 Gene3D Tetratricopeptide repeat domain 241 597 IPR011990 GO:0005515
Bach5g01955 600 MobiDBLite consensus disorder prediction 177 232 - -
Bach5g01955 600 ProSiteProfiles TPR repeat profile. 431 464 IPR019734 GO:0005515
Bach5g01955 600 Coils Coil 558 591 - -
Bach5g01955 600 MobiDBLite consensus disorder prediction 68 129 - -
Bach5g01955 600 SUPERFAMILY TPR-like 243 467 IPR011990 GO:0005515
Bach5g01955 600 Pfam Tetratricopeptide repeat 514 544 IPR001440 GO:0005515
Bach5g01955 600 MobiDBLite consensus disorder prediction 179 215 - -
Bach5g01955 600 ProSiteProfiles TPR repeat profile. 243 276 IPR019734 GO:0005515
Bach5g01955 600 Pfam TPR repeat 250 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01955 Bach-Chr5 28374131 28377096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01955 244 479 U-box Gene Family AT3G07370 27.138 2.64e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01955 - - qsa:O6P43_023216 760.755