Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01937 ATGACGACGCCAAATTCGAACGGAGTTTTCGAAGTCCCGTCGGCACTTGCCGTGACCCGGATAGCGCATGGGAAAGATCCGAATAGCAGCGCGGATCCTCGGGTTCCCCTCCAGAATCTGCTCATGGTCAGAACGAGAATGGATTCGCTGCAAAGCTTCCTGTCAGAATCCATCAACAGCAACATTCTGGTCAGCAAAGATCAGATGGATATGGTCTCCAATGAGATCGTCTCTGCCATCCACCAGATAATAGTCAACGGTGCTGCTCTCGTTTCCGCCGGAGCCTCCATGAAATTACCCGATCCACCAGATATGGTACCTTGTAAGAGGCCACGGTTGGATTTCTCCAGTACCGAAAAGGGTAAACAGGGGCTTGATGTGAAAGTTGAAGTTTTAGACGAAAAGGGTAAACAGGGTTCTGATTTGAAAGTTGAAGTTTTAGACGATGAGGATTGTGAAGATTATGGAGATGATTGTGAAATCGTGGAGCTGGACGCCATGGAATTACTCGCGGAGCATATTCATTTCTGTGAAATTTGCGGAAAAGGGTTCAGACGAGATGCCAATTTGCGAATGCACATGCGTGCTCATGGGAATCAGTTCAAGACACCGGAAGCGTTGGCGAAACCCTCAGAGAAATTCGATAGCACGCGTCGTAGAGCGACGCGGTTTTCTTGCCCATTCATAGGTTGCAACCGAAACAAGTCCCACAAGAAATTCCGGCCATTAAAGTCAATTGTTTGCTTGAAGAACCATTTCAGAAGAAGTCACTGCCCAAAAATGTATTCATGTAATCGGTGCCACAAGAAGAATTTCTCGGTACTTTCTGATTTGAAGAGCCATCTGAAGCATTGCGGGGAATCCAAGTGGAAGTGCTCGTGTGGAACAACCTTTGCCAGGAAGGATAAGTTGTTTGGGCACATAGCATTATTTGAAGGGCACATGCCAGCTCTTGCACCGGATGAAGAAGAGAAAGGGAAGCAAGTGGTGGTAATGGAGGATGAAGAAAGGGATAGAATGCTGGAAGAAGGGGATTTGGGGGTTGATTGTTTTGACGATGGGTTACCGGAAGGATTCTTCGACGATTTAGATGCTTTTGGCGCAATTGAGAACTATTGTTTACAAGATGCTTTCACCATTCCTAATAATGTTACTCATGGAGGATTTCAGTAA 1173 0.4638 MTTPNSNGVFEVPSALAVTRIAHGKDPNSSADPRVPLQNLLMVRTRMDSLQSFLSESINSNILVSKDQMDMVSNEIVSAIHQIIVNGAALVSAGASMKLPDPPDMVPCKRPRLDFSSTEKGKQGLDVKVEVLDEKGKQGSDLKVEVLDDEDCEDYGDDCEIVELDAMELLAEHIHFCEICGKGFRRDANLRMHMRAHGNQFKTPEALAKPSEKFDSTRRRATRFSCPFIGCNRNKSHKKFRPLKSIVCLKNHFRRSHCPKMYSCNRCHKKNFSVLSDLKSHLKHCGESKWKCSCGTTFARKDKLFGHIALFEGHMPALAPDEEEKGKQVVVMEDEERDRMLEEGDLGVDCFDDGLPEGFFDDLDAFGAIENYCLQDAFTIPNNVTHGGFQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01937 390 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 26 333 IPR044300 GO:0010044|GO:0010447
Bach5g01937 390 SMART c2h2final6 175 197 IPR013087 -
Bach5g01937 390 SMART c2h2final6 224 257 IPR013087 -
Bach5g01937 390 SMART c2h2final6 262 284 IPR013087 -
Bach5g01937 390 SUPERFAMILY beta-beta-alpha zinc fingers 171 198 IPR036236 -
Bach5g01937 390 Gene3D Classic Zinc Finger 175 198 - -
Bach5g01937 390 ProSitePatterns Zinc finger C2H2 type domain signature. 177 197 IPR013087 -
Bach5g01937 390 ProSiteProfiles Zinc finger C2H2 type domain profile. 175 202 IPR013087 -
Bach5g01937 390 FunFam Zinc finger 45-like 172 198 - -
Bach5g01937 390 Gene3D Classic Zinc Finger 259 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01937 Bach-Chr5 27968303 27969475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01937 147 325 C2H2 Transcription Factor Family AT1G34370 59.677 4.12e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach5g01937 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01937 - - qsa:O6P43_023190 461.455