Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01920 TCCCTTCCCTTCCCTTCCCTCCCCTGTCTTTTCCACTGTAGATGAACAGACATAGACTACTAAATCATGTAGAAAGAGGTAGATTGCAATGAGAAAATTTTCTTGTTAGGTTGGGCTCTGTAGAATCTGGGACAAAATTTTCTTGCTTGCTAGTCTGAATTTCGTTTTGTTTGATGGGTAAAGAGGGAGTATAAGTAGTGAAAATGAAGGAAGACGAGGGCTTAAATGGCGAGAGGAGGTTGTATAGTTGCCTACAGTACAGTACAAGATGGTGCTGTTTTAAGACATGAGAATTCCTTTTCAGTGGCTCCTTTTAAGTGAAAATTCCTCCAGTGTCCTCTGCTTTCCTTGAGTTCTTAAATAAGATCAAATTAATACATTAACCAAAATAATAAAAGGACCTTGATCTAATAAGATCTGTGCAGAATTCTAAATTCTTCTTCATCCACTCACATGAAGAGACTTGGCAGCTCAGATTCCTCGGGTGCCCTCGTCACCATCTGTCCATCTACAGACGAACACAGTCCGAGGAACAAGGATGTCTATGGCAGGGAGTTCCAATCCATGTTGGAAGGACTAGATGAGGAAGGCCGTGTTGAAGAATCGGGGCAGGCCTCTGAGAAGAAACGGAGACTTAGTGTTGATCAAGTTAAGGCCTTGGAGAAGAACTTCGAAGTAGAGAATAAGCTTGAACCTGAGAGGAAGGTGAAGCTAGCACAGGAGCTTGGCTTGCAGCCCAGACAAGTTGCCGTTTGGTTCCAAAACCGCCGAGCAAGATGGAAAACCAAGCAACTTGAGAGAGATTATGGCGTTCTCAAAGCCAATTATGAAGCTCTCAAGCTCAACTATGACTCCCTCCAAAACGACAATGAAACTTTACGCAAGGAGATTAAGGAATTGAAATCAAGACTGCAAGAAGATAACACGGAAAGCGAGGTTTCAGTGAAGGAAGAGATAGACTTGCCGGCCGATTCGGTCGACGACAAAATGATCGAAACCTCCATTCCCGGTTCAGAGTCCAAGGAATTGAATTATGGTTGCCTCGACATTAGCAGCGATCGATTGGGAGCCGCCACACTTTTCCCGGTGGACTTCAAAGACGACACTTCAGATAGCGATTCCAGCGCAATCTTGAATGAAGATAACAGCCTAAACCCGGCCATTTCTTCATCTGGGGTCCTTCAGAATCACCAGCTTTTGATGTCTCCTCCAGGATCATCTTCCCTCAAACTCAATTGCTCTCCATCTTCGTCTCCCTCTTCCATGGACTGCTTCCAATTCCAGAAAACATACCAGCCGCAATATGTGAAAATGGAAGAGCTCAATTTATTTAGCGCCGACGAGGCCTGCAATTTCTTCGATGAACAAGCACCCACCCTCCAGTGGTACTGCTCGGAACAATGGAGTTAA 1410 0.4468 MKRLGSSDSSGALVTICPSTDEHSPRNKDVYGREFQSMLEGLDEEGRVEESGQASEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYEALKLNYDSLQNDNETLRKEIKELKSRLQEDNTESEVSVKEEIDLPADSVDDKMIETSIPGSESKELNYGCLDISSDRLGAATLFPVDFKDDTSDSDSSAILNEDNSLNPAISSSGVLQNHQLLMSPPGSSSLKLNCSPSSSPSSMDCFQFQKTYQPQYVKMEELNLFSADEACNFFDEQAPTLQWYCSEQWS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01920 318 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Bach5g01920 318 FunFam Homeobox-leucine zipper protein HAT5 50 114 - -
Bach5g01920 318 MobiDBLite consensus disorder prediction 1 29 - -
Bach5g01920 318 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 44 240 IPR045224 GO:0003700
Bach5g01920 318 MobiDBLite consensus disorder prediction 42 61 - -
Bach5g01920 318 Pfam Homeobox associated leucine zipper 112 154 IPR003106 GO:0006355|GO:0043565
Bach5g01920 318 MobiDBLite consensus disorder prediction 1 21 - -
Bach5g01920 318 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Bach5g01920 318 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Bach5g01920 318 Gene3D - 28 113 - -
Bach5g01920 318 SUPERFAMILY Homeodomain-like 46 114 IPR009057 -
Bach5g01920 318 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Bach5g01920 318 CDD homeodomain 57 113 IPR001356 GO:0003677
Bach5g01920 318 Pfam Homeodomain 57 110 IPR001356 GO:0003677
Bach5g01920 318 SMART HOX_1 55 116 IPR001356 GO:0003677
Bach5g01920 318 Coils Coil 111 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01920 Bach-Chr5 27732984 27734729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01920 1 318 Homeobox Transcription Factor Family AT2G22430 46.724 3.30e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach5g01920 Homeodomain 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01920 K09338 - qsa:O6P43_030496 432.18