Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01914 ATGGGTCTCTCAAATTTCCCGAGTGCCGCCGATGGAGTGCTGCCGGTGCTGGTAATCAACACGGTTCTGTCGATGGTTCTGTTGAAAAACATGTTCAGATCGGTTCTTCAGGTAGTTGCTGGCAGTGAGGGTGGTAGTGCCAATTCGGAATCAGACTCGGAGGAAAGCAGTGGTTTTTCGAGGGAAAGGAGGATCTCGATAACCCAATACAAATCCTTGTGCAACAACAACTCCGCCATGGCCGCCACGACCAACGCTTCGACGGTGGAGTGCTGTGTCTGTCTCTCTGGGTTTGAAGCTAACCAGGAGGTGAGCCAGTTATCTTGCAACCATTTCTTCCACAGAGGTTGCTTGGACAAATGGTTTCATAACAACCATAGTACTTGTCCTTTGTGTCGCTCCATAGATTAA 411 0.4939 MGLSNFPSAADGVLPVLVINTVLSMVLLKNMFRSVLQVVAGSEGGSANSESDSEESSGFSRERRISITQYKSLCNNNSAMAATTNASTVECCVCLSGFEANQEVSQLSCNHFFHRGCLDKWFHNNHSTCPLCRSID 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01914 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 136 IPR013083 -
Bach5g01914 136 Pfam Ring finger domain 90 133 IPR001841 -
Bach5g01914 136 PANTHER - 1 134 IPR044249 -
Bach5g01914 136 CDD RING-H2_PA-TM-RING 90 133 - -
Bach5g01914 136 SMART ring_2 91 132 IPR001841 -
Bach5g01914 136 SUPERFAMILY RING/U-box 90 134 - -
Bach5g01914 136 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01914 Bach-Chr5 27664825 27665235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01914 1 134 C3H Transcription Factor Family AT2G04240 32.680 1.57e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01914 K16285 - gmx:100811790 176.407