LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g01908	ATTGTTTAGAGGTCTCCTCCCTTTCCCTATCAATTTGTCGCTGCCGGCTGGGAAGTTATGTTGGACGGTGAGATCGGCGACTGTACTTCTATAGATTAAAAGAACAGTAGAGTATTAGCTGCTGGTGGTGCTGGCGTTAAGCATATTCTTGTTTGAATTTTCTTCTTTATTCAATTTATCTAGTCTACGAATTATAATTATAAGGAAAGAATTAGTCAGAGAAATAGAAAGGGTCAAGGGTTTTAGGTAAGAACGTGGAAAGAGCTGAACCGGCGGGGTAGACTGAAATAGCAATATCTACTATTTTATGGTTAAACAAACACCCAAATCCAATATACCATATCTATTTCCATTTCCCTCTGCAATCTGCAGTTCCCAAGATGAAAAATCCATCCTTTTCAAGTTAATGATTAATGGGTGTGGATTGAGTTAGTTAATTTTGGAGTTCATTTAGTTTTGAGGGAGATGTTAGGAGAAGAGGGCGAGGACCGGCCCGCAGGTGTTGTTGCTCAGAGAACATTTTCGCGGTCTGTTTCGTGGACTGATCGGTCTCCAAACAGGACTGCCCCTAACCTGAGGCCACCACCAAATGGTAAGGCTCGATCCTTGTTGCCACCCCTTCAGCCCTTGTCCATCAGTAAGCGAAGTGTTGAGGAGTGGCCAAGTGCAGGATCTGATGATCTTGGAGTTTGGCCCTGTCCACAAACTCCTAGTGGGTCAATCAAAGGCAAAGCCATGGAGATTTCTGATAATTCAACTTTCACCAAAGAATTTCAATTCAAGAGGGATAAATTAGCCTTCTTTGATAAGGAATGCTCCCGAATTGCACAGCATATATACTTGGGAAGTGATACAGTCGCCAAGAATCATCAACTTTTGAGGCAAAATGGAATCACTCATGTCCTCAACTGTGTTGGGTTTGTTTGTCCTGAGTATTTCAAAAGCGATTTTGTCTATAAGACACTTTGGTTGCAGGACAGTCCAACAGAAGATATTACGAGCATCCTCTATGATGTGTTTGACTACTTTGAAGATGTTCGAGAGCAAGGTGGACGTGTCCTCGTGCATTGTTGCCAAGGAGTTTCTCGATCAACCTCTCTGGTGATTGCATATCTCATGTGGAGAGAGGGACAGAGCTTTGAAGATGCTTTTCAATATGTAAAGACTGCACGAGGAGTAACAAATCCAAATATGGGCTTTGCTTGTCAACTTCTGCAGTGTCAGAAACGGGTACATGCTATGCCTGCAAGTCCAAACTCTATTCTTAGGATGTACCGGATGGCCCCTCACTCACCATATGACCCTCTTCATCTGGTGCCTAAGATGATAAACCATCCAGGTACAAAAACACTTGATTCTCGTGGGGCATTCATCATTCATATTTCGTCTGCTATATATGTTTGGACTGGAAAAGATTGTAATTCAGTGATGTCATATCACGCCCGGACAGCAGCCTCTCAGGTTGTCCGTTATGAGAGGGCTAAGGGTCCAATTCTTAGGGTCAAAGAAGGTGAAGAGCCATCAGAGTTTTGGATTGCTCTTTCTGCTGAGCAACTCGTGTCAGGTAATTGTGACAAAGAGGAGGTCAATAAGGAAGGAGTATTGTCTTCTCAAAGCATGGAGGTTGATGAAGCTGTTACTCTTACCAAGGAGATTGGTAGAAGAAAAGTTAATGAATATGATTTGGATTTTGAAATTTTCCACAAAGCACTTGCTGGTGGGGTTGTTCCTCCATTTTCTATTTCTAATGCAGGGTCAGAGACTTGCCTCCCTGCTAGAGAAAACGGTTGGGGAAGATTGAGGAGGAAGTTTGCTAATGGTATCATGAAAGAATTGATCACATGCTCCATACGGAACTGTGATGCTACCTCATCCACTGATGAATCGTGTGTGATTATGGAGGAGGAGAATCAGCATTCTGTGCTTGATACTTTGCCACTATCACCGACCCATCCTTGTGGTTCACCTGATTCTTTTGAATGTTTTCCAAATAACAATTCAGAAAGGGCAAAAGATACCTTTGAGGTCCCACAATCTCCTCTGGGTTCACCATTCTCACCTTCCCCTTCGAGTTCTGACTATGCAAGTTCATTCTCATTTTCACCTTCATCTACAAATTGGTCTGACTGGTCATTTGTGTCTTCTCGGCAATCATCACCTTCTGGCATGGAATCAACTGAACCCTTTTATGTGAAAGATGCATCATTCTCAGAAGACTCCCCTTTGCTTGAAAAAGAAGCTGCCTCTTCACCTTCAAAGGCATTTTCTGCTAATCACACTCTAGGAGGGGTAAATACCTCTTTGCCATGCAAAGGGTATCTCCCCTCTATTGCAGAACGCAGAGGGAGTAATCCACCACCTCTGATGTTGTCTTCGGTCAATGAATCATTTCACGTCCACAAGAACTTGGAGAATTGCACCCAATAACATCCACCAACTTGGATTGTACGGATAGGGTTCCAAATATCTGTTCCACTAACATGCACATGCATTGCAAATCGTATGTTAGTTATTATCCATGTAAACCAAAATACATGTAATCTGCGCAAAGGGAACACATTGCAAAAATGGCCCTAGTGTTGGTTTGTTTCTGAAAGTGAAGTTTGCGCCCTTAAACGTGCCATCGTTGGACCAAGAGCACCGCATCTCAAGGTTTTGTTGGACCATGAACGAGTGCCTGAGCCCTCTTGTTTGCTCCAACTACGCTCCTGTGACAGCTGGGACTTCTTTGCTGTTAATGCCTCATTAATTTCGTCCCACACGTTTACTTCTCCATTTTCTTTTTCTGGAAAGAGAACCACCCGGATGAGCAGTTGTTTA	2820	0.4312	MLGEEGEDRPAGVVAQRTFSRSVSWTDRSPNRTAPNLRPPPNGKARSLLPPLQPLSISKRSVEEWPSAGSDDLGVWPCPQTPSGSIKGKAMEISDNSTFTKEFQFKRDKLAFFDKECSRIAQHIYLGSDTVAKNHQLLRQNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSILRMYRMAPHSPYDPLHLVPKMINHPGTKTLDSRGAFIIHISSAIYVWTGKDCNSVMSYHARTAASQVVRYERAKGPILRVKEGEEPSEFWIALSAEQLVSGNCDKEEVNKEGVLSSQSMEVDEAVTLTKEIGRRKVNEYDLDFEIFHKALAGGVVPPFSISNAGSETCLPARENGWGRLRRKFANGIMKELITCSIRNCDATSSTDESCVIMEEENQHSVLDTLPLSPTHPCGSPDSFECFPNNNSERAKDTFEVPQSPLGSPFSPSPSSSDYASSFSFSPSSTNWSDWSFVSSRQSSPSGMESTEPFYVKDASFSEDSPLLEKEAASSPSKAFSANHTLGGVNTSLPCKGYLPSIAERRGSNPPPLMLSSVNESFHVHKNLENCTQ	653

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g01908	653	SUPERFAMILY	Actin depolymerizing proteins	262	360	-	-
	Bach5g01908	653	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	107	258	IPR029021	-
	Bach5g01908	653	MobiDBLite	consensus disorder prediction	17	33	-	-
	Bach5g01908	653	Pfam	Dual specificity phosphatase, catalytic domain	124	254	IPR000340	GO:0008138\|GO:0016311
	Bach5g01908	653	MobiDBLite	consensus disorder prediction	509	533	-	-
	Bach5g01908	653	CDD	DSP	117	251	-	-
	Bach5g01908	653	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	116	258	IPR020422	GO:0006470\|GO:0008138
	Bach5g01908	653	MobiDBLite	consensus disorder prediction	1	53	-	-
	Bach5g01908	653	Gene3D	Severin	269	365	IPR029006	-
	Bach5g01908	653	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	175	236	IPR000387	GO:0016311\|GO:0016791
	Bach5g01908	653	SMART	dsp_5	116	255	IPR020422	GO:0006470\|GO:0008138
	Bach5g01908	653	Gene3D	Protein tyrosine phosphatase superfamily	86	258	IPR029021	-
	Bach5g01908	653	PANTHER	MKPA PROTEIN	16	644	-	-
	Bach5g01908	653	ProSitePatterns	Tyrosine specific protein phosphatases active site.	200	210	IPR016130	GO:0016311\|GO:0016791

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g01908	Bach-Chr5	27621754	27625535	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g01908	38	152	Protein tyrosine phosphatase (PTP) family	AT3G55270	55.000	4.86e-35	140

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g01908	-		-	lja:Lj6g3v0574850.1	858.211