Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01899 ATGCTAGACCAGTGTCGATGCCTCGCACCAGATTTTGATCCATTTGTTTGTTGGCCTTTCAGCCAAAAGTCGGGAAATTCTGATCAGCTTTTCTATTTGAGTGGAGAAATGGCACAGAGTAATTGGGAAGCAGATAAGATGCTTGATGTTTATATTTATGACTATTTGGTGAAGAAAAAATTACATAACACAGCCAAGTCATTCATGACAGAAGGAAAGGTTGCTCCTGATCCAGTAGCAATTGATGCTCCTGGAGGGTTTCTTTTTGAGTGGTGGTCTGTCTTTTGGGACATTTTTATTGCGAGGACAAATGAAAAACATTCTGAGGCTGCTACAGCATATTTAGAGAATCAGGCTCAACAGATTAAAGTGAAAGAGCAGCAGCTGCAAATGCAGCAGTTACAACTAATGCGTCAAGCTCAGATACAAAGAAGGGATCCTAATCATCCTCCCCTTGGTGGTCCTGTAAATGCTATTGCCACAGAAGGAATGCTTGGGCAATCCACTGCTAGTGCATTGGCTGCTAAAATGTATGAGGACCGGATGAAGCACTCTAATGCAATGGATACAGAGACATCCCAACCTCTTCTAGATGCTAGAATGGCTCTTTTGAAATCAACAACAAATCCTCCTGGCAGTCAGATGGTTCAGGGAAATGCAGGAAGTGTGACGGCAGCATTGCAGCAAATTCAGGCTCGTACTCAACAAACCCCTCAAGATATCAAAGGTGAAGTCAACATTGGCACCATGCAGAGATCTTTGCCCATGGATCCTTCTTCAATTTATGGGCAGGGAGCAATGCAGTCAAAACCTGGAATTGTAAACGCAGGATTAAATCCAGGAGTTGGTGGTCTCACGTTGAAAGGATGGCCTTTAACTGGTATCGATCAAATTCGACCAGGTTTAGGACCACAAGTTCAAAAGCCTCTCCTTCAGGGTGCTAATCAGTTTCAGCTTTTGCCACAACAACAACAACAACTTCTGGCACAGGTGCAGGCGCAAGGAAATATTGGCAATTCATCTATGTATGGAGATATGGATCCTCAGCGATTAAGGGGATTGGCTAGGGGCAGTTTGAATGTGAAAGATGGTCAACCAATTGCGAATGACGCTTCAATTGGTTCTCCAATGCAATCCACTTCATTGAAGATCAACATGCCACAGATCCAACAATCTACCTTGCAGCAGCAGGATCCCTTGCATCCACAGCAATTGCAACAGAATAATAGGAAAAGAAAAGGGCCTACATCTTCAGGACCTGCTAACAGTACTGGTACAGGAAACACTCTTGGCCCTTCTAATTCTCAGCCATCAACACCATCTACTCATACTCCTGGAGATGGAGTCACTATGGTGGGTAACCTGCAGAATGTAGGTGGTGTGTCTAAAGATGCGATATTGTATGGTTCTGATGGCGCAGGTGGTCTTGCATCGTCCACCAATCAGCTGTTGCAGGATGACATGGAACATTTTGCAGATGTTGGATCCTTAGATGATAATGTGGAGTCATTTCTCTCACATGACGATGGTGATGGAAGAGACTTGTTTGGCACGCTGAAACGGAACCCTTCTGAACAAGCTACAGATGTTTCAAAAGGTTTTTCCTTCAGTGAAGTTGGTTCCATACGCAAAAGCAATAGCAAAGTTGTTTGCTGTCATTTTTCTTCAGATGGGAAGTTATTGGCCAGTGCTGGACATGACAAGAAGGTTGTTTTGTGGAACATGGACACATTGCAAACAGAGAGCACTTTAGAGGAGCACACGCTTATCATTACTGATGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACATCTTCATTTGATACAACTGTGCGGCTTTGGGATGCTGCAGATCCAAACTTATGTTCACAGTCAATATATACTGGTCACACCTCACATGTGATGTCCCTTGATTTCAACCCTAAGAAAAATGATGTTTTCTGTTCTTGCGATGCTAATAATGAGATTCGCTTGTGGAATATTAATCAATATTCCAGCACTCGTGTTTTAAAGGGAGGCTCTGCACAGGTGAGGTTTCAACCAAGGTTAGGACACCTTCTGGCTGCAGCATCCGATAATGTTGTGTCACTCTTTGATGTTGAGTCTGACAGGCTGGTGCGCTCATTGCAGGGACACACTACCGATATACACTCTGTTTGCTGGGATACAAACGGAGATTACTTGGCATCTGTGAGTCAAGAGTCTGTCAGAGTATGGTCTCTTGCCTCTGGGGAGTGTATTCACGAACTTAACTCCAGCGGAAACATGTTCCACTCATGCGTTTTTCATCCAAGCTACTCCACTCTCTTGGTTATTGGAGGTTACCAGTCTTTGGAGCTGTGGAACATGGCTGAGAATAAGAGTATGACTATACCAGCTCATGAGTGTGTGATATCAGCTCTGGCACAATCACCAGTGACAGGAATGGTTGCTTCTGCTAGTCATGATAAGTCAGTAAAAATTTGGAAATAAGATTGATTGTGCTTTGTGGTTGAAACAGCCATATTAAGTATTCTGCCTTTTACATTCTTATGGGTAACAAAAGTCTGAATAAGTAACAGCTGAAGAAATTTACAAAGGAACAAGGGGGGAAAACAGTCCCCTATGTATTTATTTCTCTTTTGATTACCCTTTCTCTTTGCTTCTCTGTCATTATTTTACTGTGTTCATATAATAAGGGGGTTACGGGCTTTCTTAGAATCTTAGTCACAAAGTGAAGGTATGGCTCTTCTTGTTTTTGTTTTTCTTGTTTCCACTTTGCTCACTTTACCTTTCCTTGTCCATTTGGTTGATTACTGGATACATGTGAAATTGAG 2819 0.4282 MLDQCRCLAPDFDPFVCWPFSQKSGNSDQLFYLSGEMAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVAPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEAATAYLENQAQQIKVKEQQLQMQQLQLMRQAQIQRRDPNHPPLGGPVNAIATEGMLGQSTASALAAKMYEDRMKHSNAMDTETSQPLLDARMALLKSTTNPPGSQMVQGNAGSVTAALQQIQARTQQTPQDIKGEVNIGTMQRSLPMDPSSIYGQGAMQSKPGIVNAGLNPGVGGLTLKGWPLTGIDQIRPGLGPQVQKPLLQGANQFQLLPQQQQQLLAQVQAQGNIGNSSMYGDMDPQRLRGLARGSLNVKDGQPIANDASIGSPMQSTSLKINMPQIQQSTLQQQDPLHPQQLQQNNRKRKGPTSSGPANSTGTGNTLGPSNSQPSTPSTHTPGDGVTMVGNLQNVGGVSKDAILYGSDGAGGLASSTNQLLQDDMEHFADVGSLDDNVESFLSHDDGDGRDLFGTLKRNPSEQATDVSKGFSFSEVGSIRKSNSKVVCCHFSSDGKLLASAGHDKKVVLWNMDTLQTESTLEEHTLIITDVRFRPNSTQLATSSFDTTVRLWDAADPNLCSQSIYTGHTSHVMSLDFNPKKNDVFCSCDANNEIRLWNINQYSSTRVLKGGSAQVRFQPRLGHLLAAASDNVVSLFDVESDRLVRSLQGHTTDIHSVCWDTNGDYLASVSQESVRVWSLASGECIHELNSSGNMFHSCVFHPSYSTLLVIGGYQSLELWNMAENKSMTIPAHECVISALAQSPVTGMVASASHDKSVKIWK 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01899 824 PRINTS G protein beta WD-40 repeat signature 603 617 IPR020472 -
Bach5g01899 824 PRINTS G protein beta WD-40 repeat signature 811 824 IPR020472 -
Bach5g01899 824 PRINTS G protein beta WD-40 repeat signature 561 575 IPR020472 -
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 628 663 - -
Bach5g01899 824 SMART WD40_4 703 741 IPR001680 GO:0005515
Bach5g01899 824 SMART WD40_4 577 616 IPR001680 GO:0005515
Bach5g01899 824 SMART WD40_4 785 824 IPR001680 GO:0005515
Bach5g01899 824 SMART WD40_4 535 574 IPR001680 GO:0005515
Bach5g01899 824 SMART WD40_4 744 783 IPR001680 GO:0005515
Bach5g01899 824 SMART WD40_4 621 661 IPR001680 GO:0005515
Bach5g01899 824 SMART WD40_4 664 700 IPR001680 GO:0005515
Bach5g01899 824 Pfam Coatomer WD associated region 640 745 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Bach5g01899 824 Pfam WD domain, G-beta repeat 581 616 IPR001680 GO:0005515
Bach5g01899 824 Pfam WD domain, G-beta repeat 547 574 IPR001680 GO:0005515
Bach5g01899 824 Pfam WD domain, G-beta repeat 790 824 IPR001680 GO:0005515
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 792 824 - -
Bach5g01899 824 Gene3D - 518 678 IPR015943 GO:0005515
Bach5g01899 824 Gene3D - 679 824 IPR015943 GO:0005515
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 584 616 - -
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats profile. 542 583 IPR001680 GO:0005515
Bach5g01899 824 Coils Coil 115 144 - -
Bach5g01899 824 ProSiteProfiles LIS1 homology (LisH) motif profile. 44 76 IPR006594 GO:0005515
Bach5g01899 824 SUPERFAMILY WD40 repeat-like 536 824 IPR036322 GO:0005515
Bach5g01899 824 ProSitePatterns Trp-Asp (WD) repeats signature. 561 575 IPR019775 -
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats profile. 628 670 IPR001680 GO:0005515
Bach5g01899 824 SMART Lish 44 76 IPR006594 GO:0005515
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats profile. 710 750 IPR001680 GO:0005515
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 542 577 - -
Bach5g01899 824 MobiDBLite consensus disorder prediction 391 455 - -
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats profile. 792 824 IPR001680 GO:0005515
Bach5g01899 824 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 37 824 IPR044716 GO:0003714
Bach5g01899 824 Pfam LisH 46 72 IPR006594 GO:0005515
Bach5g01899 824 CDD WD40 538 824 - -
Bach5g01899 824 ProSiteProfiles Trp-Asp (WD) repeats profile. 584 616 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01899 Bach-Chr5 27444384 27456247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01899 628 823 Miscellaneous Gene Families AT5G08390 25.373 2.64e-15 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Bach5g01899 Coatomer_WDAD 1.5e-08 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01899 - - gmx:100797756 1331.62