Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01882 CTCTGCACTACCAAAACCCCTTTCTACTCACAAAAAAGTCCCTTCTCCCCTCATAGCCATAGGCATTAATCATAATGGCATTTTGCAACAAACTAGGGAATATCTTGAGGCAGGGTGCTGCTCAGAATAAACAACTACCAGCACCTATGCTTAATTATCTTCGTTGCATGTCATCAAGCAAGCTTTTCATTGGAGGTCTTTCATATGGAGTTGACGACCAGTCTCTTAAGGATGCATTTACCAGCTTCGGAGATGTGGTTGAGGCAAGAGTTATCACTGATAGAGACACTGGAAGGTCTAGGGGATTTGGATTTGTCAACTTCTCGAGTAATGAATCAGCAAGTTCAGCACTTTCTGCAATGGATGGACAGGAGCTAAGTGGGCGAAATATTAGGGTGAGCTATGCAAATGATAGGCCTTCTGGACCCCGAACTGGTGGCGGTGGCGGCTACGGTGGTGGTGGTTATCAAAGAAATGGAGGCTATGGTGACTCAGGCTATTAGGTTGTAGTACTTAGGGGCCAAGTCTCCATTTTATTGTGGTTTTGTCCAATCCTTTAAGTAAGGTTACTGTTCAAGTGATAAATTATACACTGGTTAAAGTTATGATTTTAATTATTCTATTGGTCGTTCTGATTGCTTTATGAGGGTGAGC 654 0.4297 MAFCNKLGNILRQGAAQNKQLPAPMLNYLRCMSSSKLFIGGLSYGVDDQSLKDAFTSFGDVVEARVITDRDTGRSRGFGFVNFSSNESASSALSAMDGQELSGRNIRVSYANDRPSGPRTGGGGGYGGGGYQRNGGYGDSGY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01882 142 Gene3D - 13 142 IPR012677 -
Bach5g01882 142 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 107 IPR000504 GO:0003723
Bach5g01882 142 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 32 136 - -
Bach5g01882 142 CDD RRM2_NsCP33_like 36 111 - -
Bach5g01882 142 MobiDBLite consensus disorder prediction 104 142 - -
Bach5g01882 142 FunFam Glycine-rich RNA-binding protein 2 24 142 - -
Bach5g01882 142 SUPERFAMILY RNA-binding domain, RBD 32 141 IPR035979 GO:0003676
Bach5g01882 142 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Bach5g01882 142 SMART rrm1_1 36 109 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01882 Bach-Chr5 27102109 27104765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01882 34 126 Eukaryotic Initiation Factors Gene Family AT1G49760 39.785 6.40e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01882 - - qsa:O6P43_002606 208.764