Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01879 GATGAGCTTGCATAATTTCAGTTCTTGATGACAAAAAGCTCTGCACCTTAAGGACGCTGAATCAATATTATTAATACTCATTGATCCTTGTTGAAGGTTTGGTTACATTAGTTCTAGAATTATTTGTGGCTTTGCAATAGCAGAACTTTGTAGTTCGGTGCTTCCAAATGGCAAGAGTAAGAGATAGAACAGAAGATTGTAAAGATGCCATACGACATGGTGCTTGCTCTTTGGGATATGATGAGGCCAAATTGGCATCTATTATGGCATCTTTCATTATTCATAAACCTCGGCAAAGGTTACCTTTTACAAAAGCTGCATTTAAGACGCTTGAGAGCATTGGAGAATTAGAACAGTTTCTGTCGAAGCATAGAAAGGACTATATAGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATTGAACATGAAGTCAGTGCTTTTATTAAAACTTGCCAAGAACAAATTGATATTCTCAAAAATAGCATCAATGATGAAGAGGCAAACTCAAAAGGCTGGCTTGGTATCGGAAGTGCTAATTCTAATGCGGACACCATTGCCCACAAACACGGAGTGGTTCTAATCCTAAGTGAGAGACTCCATTCAGTTACTGCACAGTTTGATCAGCTCAGAGCTATACGCTTCCAGGATGCTATTAATAGAGCAATACCACAAAGAAAACTTAACAGTGTGAGTCGAACAGGTTCTGCAGAAAACTCTAAATTGAGGGATGTGGAGCCCAAAGAACCTGATGAGTTACACAATGAACCTCTAAGAGTCCAACAACAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAATCTTCTAGATGCCGTTCAGGAAACTGAGACTAAGATGGTGGAAATGTCTGCATTGAATCACCTTATGTCCACACATGTTTTGCAACAGTCTCAGCAAATTGAGTGTCTTTATGAGCAGGCTGTTGAAGCAACTAAGAATGTTGAACTTGGCAACAAAGAACTCTCCCAGGCCATTCAGCGGAACAGTGGCAGCAGGACTTTTCTTTTACTGTTTCTGTTTGTACTTACCTTTTCAATCATCTTTCTTGATTGGTACAGTTAAATGTAATCTAGCTCTCTTCTTCAATGTCGTGTGTACTGTTGCAAGCACCGTTGTTAATCATCCGTGCTGCTTCATATGAAATTGTTAGTAGCCCTAGCACTGCAATGTCTGTTAATGTTGTTGACATGGTCAATGTCTGTAGCCCTAGCCCTAGCTTAAATGTCTTAGTTACATTCTTTCTTGTTAATGGGCGTACTGGCTTTAGACTGTGTTGCCTTGAGGTACAGAGTCTGTCAGGGATGGAGGCAAAGTTTTCTTTCTGTGACAGCAATTGGGAAGGTTGCACCCCACGCTGACCTGCCGCGTTGCCATCTTTACTATAGAGGACTCCATGCAAGAAGCTGAAGCCAGAGAATGAGATGTGACTATTTTATTGATAAATTGAAATTAAGGGACATGAGCATACGTTCCATAGGAATCGAGGACCTTAGTGTTGAAGATAATCTCTACGCATCTCCAGAATTTCTCTTTTGGCCACAAGACATTATATTGTGTATCTAGTTGTTAGCAGTAAAAGACCATATCTTAGTTTTATTGGACAGGCTTTAATTCTTGGGCCTACTGAAAATTAATCCGACTGCTGTTCTCGAGGAAATACTTGGCTG 1702 0.406 MARVRDRTEDCKDAIRHGACSLGYDEAKLASIMASFIIHKPRQRLPFTKAAFKTLESIGELEQFLSKHRKDYIDLHRTTEQERDSIEHEVSAFIKTCQEQIDILKNSINDEEANSKGWLGIGSANSNADTIAHKHGVVLILSERLHSVTAQFDQLRAIRFQDAINRAIPQRKLNSVSRTGSAENSKLRDVEPKEPDELHNEPLRVQQQLLDDETRALQVELTNLLDAVQETETKMVEMSALNHLMSTHVLQQSQQIECLYEQAVEATKNVELGNKELSQAIQRNSGSRTFLLLFLFVLTFSIIFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01879 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Bach5g01879 309 Coils Coil 94 114 - -
Bach5g01879 309 Coils Coil 305 309 - -
Bach5g01879 309 FunFam Syntaxin-81 like 212 306 - -
Bach5g01879 309 SUPERFAMILY t-snare proteins 53 273 IPR010989 GO:0016020|GO:0016192
Bach5g01879 309 Gene3D - 212 306 - -
Bach5g01879 309 MobiDBLite consensus disorder prediction 174 197 - -
Bach5g01879 309 PANTHER SYNTAXIN-18 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01879 Bach-Chr5 27010571 27018828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01879 67 309 SNARE and Associated Proteins AT1G51740 75.410 1.94e-116 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01879 K08492 - qsa:O6P43_016722 501.13