Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01845 ATGGCCTCTATTACGCATTCTGGAAGTGGCTCTACTACTGCTAGTGCTGCAAGGGTGCTGCTGGCCTGGGTGGGTGCTGGTGGAGAAGCTAAGGACACCGGAGGGGGAGAAACAGAGGGACTGGGGACCGAAGGAGAAAAATCAGAGGCAGAGCTGGCTTGGCTTGACGCCGGGGAAGAAATCAAAGGGGTAGCCGACAATCAAATTGAGGGCAATGAGGTGAGTAAGGAGATGGATTTAGATCTAATCAAGCAAAACAGTCAGGTGGAGAGGGTAATTGCAGGTAGGATCAACAGAGATAACTCAGACAATGTCATTACTGAATACCTGGTCAAATGGCAAGGACTATCCTATGCAGAAGCAACATGGGAGAAGGATGTTGATATTGCTTTTGCTCAACATGCCATTGACAAGTATAAGGCTCGTGAGGCTGCTATGTCAGTTCAAGGAAAGATGGTAGATCCCCAGCGCAAGAAGAGCAAAGCAAGTTTGCGGAAGCTTGATGAACAGCCTGAATGGTTGAAGGGTGGAAGGCTCCGTGATTATCAACTTGAGGGTTTGAATTTTCTTGTTAACAGTTGGAAAAATGATACAAATAATGGCCAGCAAATCCATGGTCCCTTTCTTGTGGTTGTCCCATTGTCCACGTTGTCAAACTGGGCCAAAGAATTCTGGAAGTGGCTTCCTGATATGAATATTATTGTATATGTTGGTACACGTGCAAGTCAAGGGGTTTGCCAACAGTATGAATTTTATAATGACAAAAAGGTTGGGAGGCCTATAAAATTTATTGCATTGTTGACTACATATGAAGTTATTCTGAAGGATAAGGCTGTTCTCTCCAAAATCAAATGGAATTATCTTATGGTTGATGAGGCCCATAGACTAAAAAATAGCGAGGCACAGTTGTACACAACACTCTTAGAATTTGGCACCAAGAACAAGCTGCTTATCACTGGTACTCCTCCACAGAATAGCGTTGAGGAGCTATGGGCTTTGCTTCACTTCCTTGATCCTGATAAGTTTAAGAGCAAGGATGACTTCGTTCAAAACTACAAGAATCTAAGTTCATTCAATGAAAATGAGCTTGCTGATCTTCATATGGAATTGAGGCCTCACATACTCCGAAGAGTTATCAAAGACGTGGAGAAATCTTTACCCCCCAAAATTGAGCGTATTATAAGGAGTGAAATGTCTCCTCTTCAGAAACAGTATTATAAATGGATTTTAGAATGCAACTTTCATGATTTGAACAAAGGAGATCAAGGGAATCAGGGTTCTCTTCTTAATATTGTGGTAGAATTAAAGAAGTGCTGCAATCACCCCTTCCTATTTGAAAGTGCTGACCATGGTTATGGTGGGGACTCAGGAAGTAGTGACAGAAGTAAAGTGGAGAGAATTGTCTTTAGCAGTGGGAAGCTTGTCATACTTGATAAGCTGCTGGTTCGATTGCATGAGACAAAGCATCGTGTTCTGATTTTCTCTCAGATGGTCGGGATGTTGGATATGCTGGCAGACTATATGTCACTTAGAGGGTACCAATTCCGGAGGCTTGATGGCAGTACAAAGGCTGAGTTGCGGCAGCAGGCTATGGACCATTTTAATGCACCTGATAGTGATGATTTCTGCTTCCTCCTTTCAACACGAGCAGGGGGTCTTGGTATAAACCTTGCCACAACAGACACTCTTATAATATTTGATTCGGACTGGAATCCCCAAAATGACCTACAGGCCATGAGTAGAGCTCATAGAAATGGGCAACAAGAAGTTGTAAACATTTATAGATTTGTAACAAGCAAAAGTGTAGAGGAAGAGGGTAGACTGGAGGAGAAAGAAGCCAAAAAAGGAAGTTATTTTGACAAAAATGAGCTATCAGCAATCTTAAGATTTGGAGCGGAAGAGCTTTTCAAGGAGGAGAAACATGATGAAGAAAGCAAGAAACGACTCTTAAGTATGGATATAGATGAGACACTTGAAAGAGCAGAGAAGGTTGAGGAGGAGGAAGATGAGGGAGAACAAGTGCATGAGTTGTTGAGTGCCTTCAAGGTTGCTAATTTCACTAATGGTGAGGACGATGGAAGTTTCTAG 2088 0.4272 MASITHSGSGSTTASAARVLLAWVGAGGEAKDTGGGETEGLGTEGEKSEAELAWLDAGEEIKGVADNQIEGNEVSKEMDLDLIKQNSQVERVIAGRINRDNSDNVITEYLVKWQGLSYAEATWEKDVDIAFAQHAIDKYKAREAAMSVQGKMVDPQRKKSKASLRKLDEQPEWLKGGRLRDYQLEGLNFLVNSWKNDTNNGQQIHGPFLVVVPLSTLSNWAKEFWKWLPDMNIIVYVGTRASQGVCQQYEFYNDKKVGRPIKFIALLTTYEVILKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFGTKNKLLITGTPPQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNENELADLHMELRPHILRRVIKDVEKSLPPKIERIIRSEMSPLQKQYYKWILECNFHDLNKGDQGNQGSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDRSKVERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVGMLDMLADYMSLRGYQFRRLDGSTKAELRQQAMDHFNAPDSDDFCFLLSTRAGGLGINLATTDTLIIFDSDWNPQNDLQAMSRAHRNGQQEVVNIYRFVTSKSVEEEGRLEEKEAKKGSYFDKNELSAILRFGAEELFKEEKHDEESKKRLLSMDIDETLERAEKVEEEEDEGEQVHELLSAFKVANFTNGEDDGSF 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01845 695 SUPERFAMILY Chromo domain-like 70 142 IPR016197 -
Bach5g01845 695 Coils Coil 647 674 - -
Bach5g01845 695 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 74 690 - -
Bach5g01845 695 ProSiteProfiles Chromo and chromo shadow domain profile. 87 151 IPR000953 -
Bach5g01845 695 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 184 340 IPR014001 -
Bach5g01845 695 Gene3D - 72 142 - -
Bach5g01845 695 FunFam protein CHROMATIN REMODELING 5 isoform X2 89 141 - -
Bach5g01845 695 CDD SF2_C_SNF 462 597 - -
Bach5g01845 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 641 IPR027417 -
Bach5g01845 695 Pfam Helicase conserved C-terminal domain 473 586 IPR001650 -
Bach5g01845 695 SMART chromo_7 85 144 IPR000953 -
Bach5g01845 695 Gene3D - 202 386 IPR038718 -
Bach5g01845 695 Gene3D - 147 200 IPR038718 -
Bach5g01845 695 Pfam Chromo (CHRromatin Organisation MOdifier) domain 88 142 IPR023780 -
Bach5g01845 695 Gene3D - 387 605 IPR027417 -
Bach5g01845 695 SMART helicmild6 502 586 IPR001650 -
Bach5g01845 695 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 476 636 IPR001650 -
Bach5g01845 695 SMART ultradead3 175 351 IPR014001 -
Bach5g01845 695 CDD CD2_tandem 85 141 - -
Bach5g01845 695 Pfam SNF2-related domain 205 444 IPR000330 GO:0005524|GO:0140658
Bach5g01845 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 377 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01845 Bach-Chr5 25589472 25594079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01845 174 605 RAD5 or RAD16-like Gene Family AT1G02670 22.664 1.28e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach5g01845 SNF2_N 5e-52 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01845 K11367 - gmx:100808039 1059.67