Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01838 ATGGCTTCCAATTATTCCACAGAGAATGGAGTGGGGAAAGTATGCCCTCAACTTCCAGAGGACAATGCTTGCCTCTCTGCCATGCTACTTTCCACCACTCAGGTCTATCCTGCAGTGCTTAATGCTGCTCTTGAGCTCAACTTATTTGAGATCATAGCTAAGGCAAGCCCACCAGGTTCACGCTTGTCTGTCTCGGAAATTGCTTCCCAGCTGCCAAACCAATACCCAGACTTGGCTCCTAGGCTTGAACGTATGCTGCGTTTGCTTGCCAGTTACACTCTTCTTGAGTGTTCTACACGCAGCAAAGAAGACGGTAGCTCTGAAAGAGTTTACGCACTCTCAGAAAGTTGTAAATACTTGGTGCCTGATGATAAGAAAGGCTACTTGGCTTCATTCACAACATTTCTCTCTCACAGAGCACTAATGGAAATTTGGTTAAATTTCAAGCAATCCGTTGCCGATGCTGGCAATGACCTATTTAAGAAAGTTCATGGAGTCACCTCCTACCAGTACTTTGAGAAAGATCCAAATCTGAATCACATTTTTAACAAAGCAATGGCAGATGTCTGTACAGTGGAGATGAATAGGATGCTTGAAATATATGAAGGATTTGAAGGAGTCTCAACATTGGTTGATGTAGGAGGTGGAAATGGGGCTAATCTCAAAATGATTATCTCCAAGCACCCTTCAATAAAGGGAATCAATTTTGATCTGCCCCAAGTCATAGAAAATGCAACGCATTATCCAGGGATTGAGCACATTGGAGGAGATATGTTTGCAAGTGTTCCAAAGGGTGATGCCATAATATTGAAGGCTGTCTGCCATAATTGGGAAGATGAAAAGTGTGTTGAATTTCTGAGGAATTGTTACCAAGCTTTGCCACAAAAAGGAAAAGTGATTGTTGTGGAGTTCATATTACCAGAAACCCCAGGAGCAACTGATGCATCAAAGTTGGTTTCAATTCTTGACAATCTAATGTTTATTACTGTTGGTGGAAAAGAGAGGACAGAGAAAGAGTTCGAGAACTTATCCAAGAGATCTGGGTTTTCCAAATTTCAAGTTGCCTGCCGTGCTTTCCAAGCCTTGGGAGTGATGGAATTTTATAAATAA 1110 0.4207 MASNYSTENGVGKVCPQLPEDNACLSAMLLSTTQVYPAVLNAALELNLFEIIAKASPPGSRLSVSEIASQLPNQYPDLAPRLERMLRLLASYTLLECSTRSKEDGSSERVYALSESCKYLVPDDKKGYLASFTTFLSHRALMEIWLNFKQSVADAGNDLFKKVHGVTSYQYFEKDPNLNHIFNKAMADVCTVEMNRMLEIYEGFEGVSTLVDVGGGNGANLKMIISKHPSIKGINFDLPQVIENATHYPGIEHIGGDMFASVPKGDAIILKAVCHNWEDEKCVEFLRNCYQALPQKGKVIVVEFILPETPGATDASKLVSILDNLMFITVGGKERTEKEFENLSKRSGFSKFQVACRAFQALGVMEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01838 369 Gene3D - 7 120 IPR036388 -
Bach5g01838 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 359 IPR029063 -
Bach5g01838 369 SUPERFAMILY "Winged helix" DNA-binding domain 21 124 IPR036390 -
Bach5g01838 369 PIRSF O-mtase 8 369 IPR016461 GO:0008168
Bach5g01838 369 PANTHER O-METHYLTRANSFERASE 28 359 IPR016461 GO:0008168
Bach5g01838 369 FunFam Caffeic acid O-methyltransferase 123 369 - -
Bach5g01838 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Bach5g01838 369 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Bach5g01838 369 FunFam Caffeic acid 3-O-methyltransferase 9 120 - -
Bach5g01838 369 CDD AdoMet_MTases 209 306 - -
Bach5g01838 369 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Bach5g01838 369 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01838 Bach-Chr5 25389864 25391787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01838 17 369 Monolignol Biosynthesis Gene Families AT5G54160 49.153 4.59e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01838 - - gmx:100787536 518.85