Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01792 ATGATTTCAGATGTTATGATACATGGAAACAAAGAGGTTTCAGATTCCAATGATGTCACTTCTGCTTTTCATGCAGCAAAACGTGCGAGGTACAAAGATGAAGACCTGCAAAAGTTCAAAGGCGTTGTGCCACAACAAAATGGGCATTGGGGTGCACAAATATATGCAGACCACCACAGAATTTGGCTGGGAACGTTTAAATCTGAAAGAGAAGCCGCTATGGCATATGATAGCGCCACCATCAAACTTCGAAGCAGAGAGAGCCATCGAAACTTCCCATGGAATCACCAAACAGTTCAAGAACCTCATTTTCAACGCCATTATAGCACGGAAGATGTGCTTAACATGATTAGAGATGGCACCTATCAATCAAAATTTGCTACATTTCTTAAGAATGATAAAACTCAACATGGCGACGGCATTGGAACCAGTTCGAAGCAAATAAGGGTGAATTGTGATGAAAAACTATGTTGCAACCAACTTTTTCAAAAGGAATTAACACCAAGCGATGTGGGGAAGCTCAACAGGCTAGTCATCCCTAAAAAGCATGCAGTTAGGTACTTTCCTTATGTTCGTGGCGCTGAGGAAGAGAATAATAATGGGGTGGAAAATGGTGGGGTTGGTGACATTGAGCTTGTATTTTATGACATGCTCAGGAGAGCATGGAAGTTCCGGTATTGCTATTGGAGGAGCAGCCAGAGCTATGTCTTCACAAGAGGGTGGAATAGGTTTGTGAAGGATAAAAATTTGAGGGCTAAGGATACTATTGTATTTTATACTTGTGACCCCTCAAATCTAGGAACAGAAGGCCCAGTTTTTGCTTTGATTGATGTCATCTTTAACGGAGATGAGAGAAGGAATTGCTTTGAAGGGATAAATCGAGATCTGCAACAAAATTTGAAAAATGTTTCAAGTTTCAATGAAGTAGAAGAAGATGAAGATCATGAGAAACAACGCAAGGATGAAAAAGAATTGAGTGCATTGCATGCATCACGTAATGCACGAAAAGGTTTGAGGCTCTTTGGTGTACATATTAACTAA 1041 0.4044 MISDVMIHGNKEVSDSNDVTSAFHAAKRARYKDEDLQKFKGVVPQQNGHWGAQIYADHHRIWLGTFKSEREAAMAYDSATIKLRSRESHRNFPWNHQTVQEPHFQRHYSTEDVLNMIRDGTYQSKFATFLKNDKTQHGDGIGTSSKQIRVNCDEKLCCNQLFQKELTPSDVGKLNRLVIPKKHAVRYFPYVRGAEEENNNGVENGGVGDIELVFYDMLRRAWKFRYCYWRSSQSYVFTRGWNRFVKDKNLRAKDTIVFYTCDPSNLGTEGPVFALIDVIFNGDERRNCFEGINRDLQQNLKNVSSFNEVEEDEDHEKQRKDEKELSALHASRNARKGLRLFGVHIN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01792 346 MobiDBLite consensus disorder prediction 307 326 - -
Bach5g01792 346 ProSiteProfiles AP2/ERF domain profile. 38 93 IPR001471 GO:0003700|GO:0006355
Bach5g01792 346 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Bach5g01792 346 CDD AP2 37 95 IPR001471 GO:0003700|GO:0006355
Bach5g01792 346 Pfam B3 DNA binding domain 162 261 IPR003340 GO:0003677
Bach5g01792 346 ProSiteProfiles B3 DNA-binding domain profile. 162 279 IPR003340 GO:0003677
Bach5g01792 346 Gene3D AP2/ERF domain 37 94 IPR036955 GO:0003700|GO:0006355
Bach5g01792 346 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 37 345 IPR044800 GO:0003700
Bach5g01792 346 SMART B3_2 162 279 IPR003340 GO:0003677
Bach5g01792 346 Gene3D - 158 272 IPR015300 -
Bach5g01792 346 SMART rav1_2 38 99 IPR001471 GO:0003700|GO:0006355
Bach5g01792 346 FunFam AP2 domain-containing protein RAP2.8 37 94 - -
Bach5g01792 346 SUPERFAMILY DNA-binding pseudobarrel domain 159 265 IPR015300 -
Bach5g01792 346 CDD B3_DNA 161 259 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01792 Bach-Chr5 22304755 22305795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01792 38 345 RAV Transcription Factor Family AT1G50680 53.605 1.60e-103 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach5g01792 B3 6.1e-24 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01792 K09287 - qsu:111998385 388.267