Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01742 ATGAAAACACAAACTCCAGTAGCAGTATTATTTCATAATCTCCAGGAAAATATTTGCAGTGATTCTTCAGAGCTTAGAGCCCCTGCAGAGAAAATACCCTCTGCCCACGCTACTCTTCTCAAGAGAAAATCTCACTCTACTTGTCTTGCACCAGATTCACTTACTCGAGCTACTGGACGTGTGAAGGAAATTCTCACTCCTAACATGGAGGATATTGAAATTGATCAAATTGTCGATGTTCCTGATACCCCTGATAGATTAGCTGCAAGACATATCATTGATCGGAAGTGTGTTAGAAATCCTGATGTCGTGGATGAAAAGAACGAGAAAAGGGAGCAGGGTTACCTTGTTGCTGAAAATGGTAAGAATAGAAGGCTAGCTATTCGTCCTGTCAACAATTCTAACAACGAAAAAGGGAAGAACAGCAGTGACTATATACACATATCCTCATCAAACAAATCCCATGCTTCTCAAAATGCTCCCATATTTAGGAGAGCTCCAACTGGAAAAATATTTATTCATGAGAGAACACACTCCAATGGAGCTGGAAAGATGGAGAAAGGGAAATCAAGTTGTACTAAGTTCCTGTCTGAATCATCTTCCCATGATGATATTGCTGTTTTAGATTTGACTGAGGAGAATGGACTGCCTCAAAGATTCAAGCATGCTTTATCTCATGAATCTAAAGATCTTGACACGCAAGACAAGAAAGAATGGAATTCAAGCATTGGGAGCTCTTTCCTACCATCTGTTCCTGATTTGTTTAATCGAGCTAACAATGCTTACCCAGGAAAATGTAAAATAGGTAACTCACATCCTAGTTCTATTGACATTGATCGTGGAAAGAGTATTCAACTGTCTGGTGATTCTCCACAAAAGAGAGAAAAGCAATTGTCTTTACATTCTTGTGTTTCTTCAAGAGTCAATGGGCAAAAAAGATTGGTACGAAATGGTTGTATTTCACCACATAATATTGCAACAGGGGCTAAACAGTTGACTGAACAGAAGAGTAACAAAATCAATGAGAATGAACAAAGCCGTGCAGGGCATGTCAGCGGGCAAAAGAGGTTGGTACGAAATGGCTGTATTTCACCCCATAATATTGCAACAAGGGCTAAACAATGGACTGAACAGAACAATAACAAAATTGATGATAATGAACAAAGCCATTCTGGGCATGCGGTCTCGAGCAATACAATGTCTCCAATCAGTATTGATGATATAGTTGCTGAAGAGAAAGGAAGCAGTAGAGCAAAGGGTAAAGAAGTACTAATTCAGCCCTCATCAAGTGCACATGATGCTATAACTATTGATGGAGTCACAGCTAGCAGCAGACCTGTGATCAATTTCGAAAAGGCTGATGATTCCACTGATGCAATTAGAAATGTGCTTAACTGCTCTGTGGGACCAAATGGTTGGAGAACTACTCGTAACCATAGGAGTACTGCTCAGCCTATATATGAGGCAAGTGGGCATCATTCAAGCAGAAATAATGATTTTAGAAGCCATGTTAGTGCCCAATATGAGGACAGACTGAACACAAGACATGCTGGGAGCAGTCATCGCAGAAAAAATCTACATTGTCCCTTAGGAGATCGAGCAGCTCAAGCAACTTCTATGATTATTTCTGAGTCTGACCAGTTGACAGGACCTCGTCCTGCAGCTGGCACACTGACCAAAAGGCAAAGGAAAGGTGGATCAACCTCCAGAGTTCCTGATGAAGTATTTGACAACTCAGAAATTATGTTTCTTGGTTCATCTGGGGAATCATCAAATTCTGGCTCATCCAGAAGCCCTGCCGTGGATCTTGACATGGTTGAGCTGTTATCTGAAACAAACTATATAGATGGAATTTCTGAAGGTTTAGATGCCATGAACAATGATGACTCAGTGGCTCGTGCAAGACAATTAGAAGCGGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAGGATTCTTTTGGAGGTGGAGAGATAGATGAACATTTAGCATGGGAACTGCAGCATGATGAGGAGCTTTTCCCTACTTTTCTTGATCATCATACATCACGCCCTAGATGGCTCCAAAGGGCATCCTCAAATAGACAACTCCGTTTACCTGCGCATCAAAATTCTTTAAATAGGAGGAGAGCTGGGACTCAAGTTCCCCGCACTAATAGAATATCACAGTTGAGAAGTGGTCTTAGTCATTCTCCTGCACGTACCATATCATCTAGAGGAAGAAATCTCCGATTTCCTTTTAATATGGACTTAGACATGAGACTTAATATATTGGAAGCACTAGAGGATCTTAGCGATATGGGAATGACTGATGACATCTTCCAAGTTCAACGTGATTTCAATGAAAATGATTATGAGATGCTATTAGCGCTTGATGAGAACAATCACCAACATGCTGGTGCATCTTCCAATCAAATCAGCAGTTTACCGCAGTCTACTATACAGACTGATAACCTCAATGAGGCATGTGCAATATGTCTTGAGACCCCAGTTAAGGGAGAAACCATTCGACATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTGCGTAGGAAAACATCATGCCCTGTGTGCAAGTCATCTATCACCTGATCCAATTTGGAGCTTCAATTGTTGGTTCATCCTGCGGCAGTGGACTTCCACATTAGTCTCATCTTGTCCATCAAGGTAATGTCAAGCATTAACTGTAAGAGGATGCCACTGTGACAACAAGGCATTTTTGCGGTTTACCTTGTTTAACTTTTGATATATATATATATACCTTGTTTAACTTTTGATATATATATATATATATATATATATCTCAAGAATACAAGGGGCTAGAAAAAGTTTCCATTTTGGTATTATTGATATTTGCTGGCAAATTTTTTTGTTATCTCTTGAATTATGATTAGTTTTGGATAGGAATATTGGGGTAAATGTTAATGAACCTTGGTGTTTGGTAGCCTC 2973 0.4003 MKTQTPVAVLFHNLQENICSDSSELRAPAEKIPSAHATLLKRKSHSTCLAPDSLTRATGRVKEILTPNMEDIEIDQIVDVPDTPDRLAARHIIDRKCVRNPDVVDEKNEKREQGYLVAENGKNRRLAIRPVNNSNNEKGKNSSDYIHISSSNKSHASQNAPIFRRAPTGKIFIHERTHSNGAGKMEKGKSSCTKFLSESSSHDDIAVLDLTEENGLPQRFKHALSHESKDLDTQDKKEWNSSIGSSFLPSVPDLFNRANNAYPGKCKIGNSHPSSIDIDRGKSIQLSGDSPQKREKQLSLHSCVSSRVNGQKRLVRNGCISPHNIATGAKQLTEQKSNKINENEQSRAGHVSGQKRLVRNGCISPHNIATRAKQWTEQNNNKIDDNEQSHSGHAVSSNTMSPISIDDIVAEEKGSSRAKGKEVLIQPSSSAHDAITIDGVTASSRPVINFEKADDSTDAIRNVLNCSVGPNGWRTTRNHRSTAQPIYEASGHHSSRNNDFRSHVSAQYEDRLNTRHAGSSHRRKNLHCPLGDRAAQATSMIISESDQLTGPRPAAGTLTKRQRKGGSTSRVPDEVFDNSEIMFLGSSGESSNSGSSRSPAVDLDMVELLSETNYIDGISEGLDAMNNDDSVARARQLEADEILARELQEQLYHEDSFGGGEIDEHLAWELQHDEELFPTFLDHHTSRPRWLQRASSNRQLRLPAHQNSLNRRRAGTQVPRTNRISQLRSGLSHSPARTISSRGRNLRFPFNMDLDMRLNILEALEDLSDMGMTDDIFQVQRDFNENDYEMLLALDENNHQHAGASSNQISSLPQSTIQTDNLNEACAICLETPVKGETIRHLPCLHKFHKDCIDPWLRRKTSCPVCKSSIT 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01742 871 FunFam RING/U-box superfamily protein 791 871 - -
Bach5g01742 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 792 871 IPR013083 -
Bach5g01742 871 MobiDBLite consensus disorder prediction 330 350 - -
Bach5g01742 871 ProSiteProfiles Zinc finger RING-type profile. 826 867 IPR001841 -
Bach5g01742 871 MobiDBLite consensus disorder prediction 545 573 - -
Bach5g01742 871 MobiDBLite consensus disorder prediction 276 302 - -
Bach5g01742 871 MobiDBLite consensus disorder prediction 131 159 - -
Bach5g01742 871 Pfam Ring finger domain 825 867 IPR001841 -
Bach5g01742 871 SUPERFAMILY RING/U-box 818 870 - -
Bach5g01742 871 SMART ring_2 826 866 IPR001841 -
Bach5g01742 871 MobiDBLite consensus disorder prediction 265 302 - -
Bach5g01742 871 PANTHER SI:CH211-59O9.10 477 871 - -
Bach5g01742 871 MobiDBLite consensus disorder prediction 330 356 - -
Bach5g01742 871 CDD RING-H2_PA-TM-RING 826 867 - -
Bach5g01742 871 MobiDBLite consensus disorder prediction 382 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01742 Bach-Chr5 18148887 18160633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01742 353 871 C3H Transcription Factor Family AT1G04790 36.015 7.79e-72 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01742 - - aprc:113872307 697.197