Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01704 ATGCCTTCTCCCCTTTCCTTCACACCCTCATCCTTTTTCTCTGATATGGGGCTTCCCAGAAGGTTAAAGTCAGAACAAGCTTGCAAAACACTTTGTCACTTAACAAAATGTTCCCCAGCTTGCAATCATACCTGCTACAGTAACTACTCAATCAATTCATTCCCCCCATCTCCTCCTCTCATCATAAATGTAATTGAACCAGCTCATAATCTCAGCAAAGCTCACGACAAAATTTCAACTGTTTTAATTATCACCCTCACTCTTCTCTCTGCTCCTTTCTTTATTTTCTTCTGCTATGCCCTCTATGCCAAGTTCCTCTCAGGTCGGTCGGGTTCAAGGAGGAGATCACAGCCACAAATGGCAGAAACCCGAGATGATTTTCTTGATGAAGAACATGGCCCTGTGGTGGACCACCCCATATGGTATATTCTTACCACTGGTCTTCAGGAATCAATTATCAGTGCCATCACAGTTTGCAAATACAAGAGAGGTGAGGGTTTGATTGAAGGAACAGAGTGCTCTGTTTGCTTGAGTGAATTTGAAGAGGATGAGACGCTTAGGTTCTTGCCTAAGTGTAGTCATGCTTTTCATCTCCCTTGTATTGATACTTGGCTTAGGTCACACACCAATTGCCCCATGTGTCGTGCTCCTATAGTCACCAACACAGCAAGAACACCATCTGAGGACCCTAATCTTGATGATTCAAGCTCTATGGAAAATACCCAGATGGAAATTGTGATAGATAATGGTGAAAACAGTGAGTATTGA 768 0.4297 MPSPLSFTPSSFFSDMGLPRRLKSEQACKTLCHLTKCSPACNHTCYSNYSINSFPPSPPLIINVIEPAHNLSKAHDKISTVLIITLTLLSAPFFIFFCYALYAKFLSGRSGSRRRSQPQMAETRDDFLDEEHGPVVDHPIWYILTTGLQESIISAITVCKYKRGEGLIEGTECSVCLSEFEEDETLRFLPKCSHAFHLPCIDTWLRSHTNCPMCRAPIVTNTARTPSEDPNLDDSSSMENTQMEIVIDNGENSEY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01704 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 223 IPR013083 -
Bach5g01704 255 SMART FANCL_C_2 169 223 - -
Bach5g01704 255 FunFam RING-H2 finger protein ATL54 148 221 - -
Bach5g01704 255 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 74 223 IPR044675 -
Bach5g01704 255 SMART ring_2 173 214 IPR001841 -
Bach5g01704 255 Pfam Ring finger domain 172 215 IPR001841 -
Bach5g01704 255 ProSiteProfiles Zinc finger RING-type profile. 173 215 IPR001841 -
Bach5g01704 255 SUPERFAMILY RING/U-box 167 223 - -
Bach5g01704 255 CDD RING-H2_EL5-like 172 215 - -
Bach5g01704 255 MobiDBLite consensus disorder prediction 222 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01704 Bach-Chr5 16835750 16836517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01704 67 226 C3H Transcription Factor Family AT1G72220 51.534 1.06e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01704 - - tcc:18608241 254.603