Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01690 ATGACCACCACGTCAACCCACATCCTCCACCATACCTCCGCCTTCATCTGCACGGTAATTTCAAAGTCCGAGCTCCGGCGCCACCTTCTTTCCACTCTTCAGCGTGAACTCTCGATCACTAGTCATATCAACCTCAAACACCTCAATCTTGCTGTTGATACTCTAGAAAACGCCATTGTCGTCTCCAACCCCACCACTCGATCCTCATCCCTCAACCTCACCGAGAAGCTTCTTCTTCCTCTCCCCCAAAACCTTATTTCCCACTTCCTCCTCTCTCTCATTCACACCCTCCGCAACCAGCCCATCAACGCCGCCTTAAGTCTGCTCCAGATCTTCCATTCAAACCCTTCGTTGGCCAGAACAGAAATCGCTCCCATTCTATATGAGAAACTATTTTCTGTCCATCTTCTCCCTGTTTTCCAGTGGTTCAATGAGCAAAGAACAACAGTTTTGTCTTCCACTTTGCCTGACTATTGTTATGCTACTTGTGATTCCTCAGTGTCATTTCAATCTGTGGTGTTACCATATTCGAAATTACTATCAAGAATAAGTGAGGATCAAACTTGTAAGCTCAGAGAGTTGGAGAAAGAGTATGAAAAGGTTCTTGATGAGAATTGCAGGGTTGTGGCACACCATTTTAAAGAGGTTTTGGAGAATAAAAATGGAAACCCATCATTTATTTCACCGTCATTGATACTAAAGAGCAGCAGAAATGGAGATAAAATGGGCAACAGTCAAGAGGAGATAGTGGAAGCCAAAATTCCTGTATTGGAGAACGGACGGTATAATCCAATATGGGCTGAAAGGGAGAATTCTGTCGAATTTCTGAGCAGTAGCAGCAGCAATACTTCCATGTATCCTCAAAGAGTTTTTCCCAAGTCCCTCAAACACCGAAAATCTTGGAAACGATTGACAATACCAACTGATTTAAACTCAAGCACTGAATGTGAGCCTACTTTGGAAGAAAATTTACCTTGTTCTTCTTCAGAATCTGAAGCCGAAATTGAGCAAAAAGACAAAAAGATGGCCATTTTAGAACCTCGACGAAGCCAGACCCAAAGAAAGATAATGCAGAAAAGTTTTGCAGATCCCAAAGGTTCTTTAGATTACCCTATGGAAGATTATGATAATCCATCACATGGAAATGGGAAACAAGCACCTCCAAAGGACTTTGTCTGTCCAATAACTAGTTATCTATTTGATGATCCAGTTACACTTGAGACAGGCCAGACATATGAACGTAAAGCTATTGAAGAATGGTTCAATAGGGGAAACTCAACTTGTCCTATCACCCGGCAGAAGCTGCAGAGTACACAGCTACCTAAAACAAATTATGTGCTGAAAAGACTAATTGCAAGCTGGAAAGAGAACAACCCAGATTATTCAATCTCATCGCCTATCACGAATCCATATACAGAAACTGAGCCTCAAGTCCAGCCAGCAATGCCTTCAACTTCTCCTAATAGTGTTATTACACATGCCACAGTTGATGCGATGATTAATGACTTGCGTCATGCAATTAAGAATCTTTATGTATCTGAGATTCTTGAGGAATCTGAAATGGCTGTGCTTCGGATTCAGCAGTTCTGGAAAGAAGAGAATCTGGGAATTGATGTTCACAGCATGCTAGCAAAACCTCCGATCATTAATGGTTTTATGGAGATTCTTTTTAACTCTGTTGATCCGCAGGTGCTGAAAGCATCAGTTTTCCTCCTTGCTGAGATGGGTTCTAGAGATAATGCTGTTATTCAGACGCTTACCCGTGTGGACTCTGATGTAGAATGTGTCATGGCTCTCTTTCTGAAAGGGTTGACAGAAGCTGTTGTATTGATATATCTCTTAAAACCTTTCCCTGCAAGTCTTGTGGAGATGGCCATGTTGGAGTCTCTTCTAGCAGTTTTCACTAAGAAAGAGGAGGATTTGGTGAAGATGTGCATGAGGCCTATAACAGCTGCAGTGCTCTTACTGGCAGATATTATTGGAAGCAATGAAGAGAGCACTGCATCTTCAGTTGTCAAGACTGTGATGTCTGAAGAGGAAGTGATGGGAAGTCTGGTTGGCAGTTTACGAGCTGACATGGCAGAGGAGAGGATTGCTGCAGTGGAGATCTTACTAAGATGTATGCAGGAGGATGGGACTTGCAGGAACACAATTGCTGAAAAAGCAGACCTATCTGCTATATTGGGAAGCTTCAACATTGCAACTGATGGACAACGTTTTAAGATTGTTCAATTTTTTTCGGAGTTAGTCAAATTAAATAGAAGGATATTCATTGAACAAACCCTCTATGTTATAAAGGAAGAAGGTGCTTTCAGTACAATGCACACTCTCCTCATTTATCTGCAGACAGCCAATGAAGAGCAATGTCCAGCTGTGGCAGGCCTCCTACTCCAATTGGATCTTTTGGTAGAGCCAATCAAGATGAGTATATACCGTGAAGAGGCAATTGATACTCTCATTTCATGTCTTAGAAACACTGATTCCCCAGCTTCACAAATAGCAGCTGCTGAGACAATTGTGTCATTGCAAGGGAGGTTCAACAGCACTGGACAGCCTCTTACCCGAGAAGTCCTTCTTAAACGCGGTGGCCTTGGCAGAACTTATAGAAGTCTTATTGAGATGGATCAGATCAGCAACTTTTCTGAAGAATCTGAAATAAATCCTGAAGAAGAGCTTGCAGCTGAGAAATGGGAAAGAAAAGTTGCATCTGTTCTAGTTAGCCATGATTTTGGTCTACTTTTTGAGGCTTTAGCAGATTGCTTGAAGAGCCGTAGAGCAGAACTAAGCACAACATGCTTCATATCAGCTACATGGCTCATATACATGCTCGGCATTCTACCAGATACAGGAATACACAGTGCAGCTCGCGTCTGCTTGCTCAAGCGCTTCATTTCTATATTAAAGTCTGCTAAGGACACAGAAGACAAAATCCTTTCTGTGCTTGCTATAAATAGCTTCATTCAGTTCCCTGATGGGTTACGTGATCTAACTATCTATGCTAAGGATGTCATAAAATGTTTGAGAGGGCTAAAGAAATCGTCTCAGTTAGCTTCTGAAATGCTTAAAGTTCTGGTTGAAGAGCAGGAATCTCAAGCGGACATATGGATACATAAGGAGTTAACCCAAATAAATTGCAATGAGAATGGAGAAGTGTTGTCTATCATCTGCCTTAAGGATAAAATATTTTCAGGCCATTCAGATGGAACTATAAAGGTTTGGAAAGTAAAAGGGAGCATGTTCCAGCTTGTGCAAGAGACTCAAGAACATACAAAGGCTGTTACAAGCTTAGCAATTTCAGAATCTGGTGACAGACTATATAGCGGTTCACTTGATCGAACAACAAAGGTCTGGTCTATTGGAAATACATTAATACATTGTGTAAAAGTTCATGATATGAAAGATCAGGTTCATAGTTTAGTTGTAGCCAATGGGACATCTTGCTTCGTTCCTCAAGGCACTGGTATCAAGGTTCAATCAATGAATGGAGAGCTGAAGTTAATAAACTCTAACAAATATGTGAGGTGCTTGTCTCTTGCCCATGGGAAACTATACTGTGGATGCCATGACAACAGCATTCAGGAGGTAGATTTGGCAACAGATGCAGTCAACAATATTCAAAGTGGTACCAAAAAATTACTTGGGAAAGCAAATCCAATCCATGCACTGAAAATTCATGGTGAATATTTATATGCAGCCAGCTCTTCCTTGGATGGAGTTACTATAAAGGCATGGAATACTTCCGATTACAGTTTGGTTGGGTCTCTGCGAACTGCATTGGAAGTGAGGGCTATGGCAGTGAGCTCACAACTAATTTATTTGGGGTGCAAAGGAGGAGCTTTGGAAATTTGGGATAGGAAGAAACTTAATAGACTTGACACATTACAAGCTTTCACAAATGGCAACGGTAGGGTTCTTTGCATGGCTCTTGATGGCAATGAAGAAATTTTGGTGATTGGAACTTCTGATGGCCAAATTCAGGTATGGGGAATAAACTAG 3996 0.4159 MTTTSTHILHHTSAFICTVISKSELRRHLLSTLQRELSITSHINLKHLNLAVDTLENAIVVSNPTTRSSSLNLTEKLLLPLPQNLISHFLLSLIHTLRNQPINAALSLLQIFHSNPSLARTEIAPILYEKLFSVHLLPVFQWFNEQRTTVLSSTLPDYCYATCDSSVSFQSVVLPYSKLLSRISEDQTCKLRELEKEYEKVLDENCRVVAHHFKEVLENKNGNPSFISPSLILKSSRNGDKMGNSQEEIVEAKIPVLENGRYNPIWAERENSVEFLSSSSSNTSMYPQRVFPKSLKHRKSWKRLTIPTDLNSSTECEPTLEENLPCSSSESEAEIEQKDKKMAILEPRRSQTQRKIMQKSFADPKGSLDYPMEDYDNPSHGNGKQAPPKDFVCPITSYLFDDPVTLETGQTYERKAIEEWFNRGNSTCPITRQKLQSTQLPKTNYVLKRLIASWKENNPDYSISSPITNPYTETEPQVQPAMPSTSPNSVITHATVDAMINDLRHAIKNLYVSEILEESEMAVLRIQQFWKEENLGIDVHSMLAKPPIINGFMEILFNSVDPQVLKASVFLLAEMGSRDNAVIQTLTRVDSDVECVMALFLKGLTEAVVLIYLLKPFPASLVEMAMLESLLAVFTKKEEDLVKMCMRPITAAVLLLADIIGSNEESTASSVVKTVMSEEEVMGSLVGSLRADMAEERIAAVEILLRCMQEDGTCRNTIAEKADLSAILGSFNIATDGQRFKIVQFFSELVKLNRRIFIEQTLYVIKEEGAFSTMHTLLIYLQTANEEQCPAVAGLLLQLDLLVEPIKMSIYREEAIDTLISCLRNTDSPASQIAAAETIVSLQGRFNSTGQPLTREVLLKRGGLGRTYRSLIEMDQISNFSEESEINPEEELAAEKWERKVASVLVSHDFGLLFEALADCLKSRRAELSTTCFISATWLIYMLGILPDTGIHSAARVCLLKRFISILKSAKDTEDKILSVLAINSFIQFPDGLRDLTIYAKDVIKCLRGLKKSSQLASEMLKVLVEEQESQADIWIHKELTQINCNENGEVLSIICLKDKIFSGHSDGTIKVWKVKGSMFQLVQETQEHTKAVTSLAISESGDRLYSGSLDRTTKVWSIGNTLIHCVKVHDMKDQVHSLVVANGTSCFVPQGTGIKVQSMNGELKLINSNKYVRCLSLAHGKLYCGCHDNSIQEVDLATDAVNNIQSGTKKLLGKANPIHALKIHGEYLYAASSSLDGVTIKAWNTSDYSLVGSLRTALEVRAMAVSSQLIYLGCKGGALEIWDRKKLNRLDTLQAFTNGNGRVLCMALDGNEEILVIGTSDGQIQVWGIN 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01690 1331 CDD RING-Ubox_PUB 388 440 IPR045210 -
Bach5g01690 1331 ProSiteProfiles U-box domain profile. 386 461 IPR003613 GO:0004842|GO:0016567
Bach5g01690 1331 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1086 1119 - -
Bach5g01690 1331 Pfam U-box domain 388 458 IPR003613 GO:0004842|GO:0016567
Bach5g01690 1331 SMART Ubox_2 390 454 IPR003613 GO:0004842|GO:0016567
Bach5g01690 1331 SUPERFAMILY RING/U-box 385 459 - -
Bach5g01690 1331 SMART WD40_4 1079 1118 IPR001680 GO:0005515
Bach5g01690 1331 SMART WD40_4 1248 1284 IPR001680 GO:0005515
Bach5g01690 1331 SMART WD40_4 1209 1245 IPR001680 GO:0005515
Bach5g01690 1331 SMART WD40_4 1036 1074 IPR001680 GO:0005515
Bach5g01690 1331 SMART WD40_4 1160 1196 IPR001680 GO:0005515
Bach5g01690 1331 SMART WD40_4 1287 1329 IPR001680 GO:0005515
Bach5g01690 1331 Gene3D - 1144 1331 IPR015943 GO:0005515
Bach5g01690 1331 Pfam WD domain, G-beta repeat 1081 1118 IPR001680 GO:0005515
Bach5g01690 1331 Gene3D - 516 875 IPR011989 -
Bach5g01690 1331 SUPERFAMILY ARM repeat 673 1012 IPR016024 -
Bach5g01690 1331 Gene3D - 989 1143 IPR015943 GO:0005515
Bach5g01690 1331 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1297 1331 - -
Bach5g01690 1331 Coils Coil 184 204 - -
Bach5g01690 1331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 373 465 IPR013083 -
Bach5g01690 1331 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 3 1330 - -
Bach5g01690 1331 ProSiteProfiles Trp-Asp (WD) repeats profile. 1297 1331 IPR001680 GO:0005515
Bach5g01690 1331 SUPERFAMILY WD40 repeat-like 1059 1330 IPR036322 GO:0005515
Bach5g01690 1331 Coils Coil 691 711 - -
Bach5g01690 1331 ProSiteProfiles Trp-Asp (WD) repeats profile. 1086 1119 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01690 Bach-Chr5 16633760 16641513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01690 388 458 U-box Gene Family AT3G46510 54.930 5.68e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01690 - - gmx:100808867 1698.33