LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g01665	ATGATGGAGCTGCTGATGAGTTTTCTGAATGAACAGGCTGCTCAAGTCAATTATATAGTTGGATCGCATGTTTGGGTTCAGGACCCGGAGGTAGCTTGGATAGATGGAGAAATTGTGGAAGTTAATGGTGCGGAGATCAAGATTAACAGTACATCAGGGAAGTCTGTTGTGGCCAAATCGTCTAATATCTATCCCAAGGATCCTGAGTTTCCTCCGTCTGGAGTTGAAGATATGACAAGGCTAGCATATTTGCATGAGCCAGGGGTTCTCCAGAATTTACAATGTCGATATGATATAGATGAAATATATACATATACAGGAAGTATATTGATTGCGGTAAACCCTTTTCGAAGAATACCTCATTTGTATGCCAGTGATATGATGGAACGGTATAAAGGGGCAGCTCTTGGTGAGCTGAGCCCTCATCCTTTTGCAATTGCGGATACTGCATATAGGATGATGATTAATGAAGGAGCAAGCCAATCCATTTTGGTCAGTGGAGAGAGTGGAGCTGGTAAAACTGAGAGTACAAAGCTGCTAATGCAATATCTTGCCTTTATGGGAGGGAGAAGCGGATCAGAGGGGCGGTCTGTGGAACAACAAGTTCTGCAGTCTAATCCTGTTTTGGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAACAACTCAAGTCGTTTTGGTAAGTTTGTGGAGCTTCAGTTTGATCAAAAAGGGAGAATTTCAGGAGCTGCTATCAGAACCTATTTGCTGGAAAGATCCCGTGTCTGTCAAGTTTCTGATCCTGAGCGAAATTATCATTGCTTTTATATGTTATGTGCTGCCCCGAAAGAGGTTGTTGATAGCTACAAATTGGGAAATCCAAGGACATTTCATTATCTAAATCAATCAAATTTCTATGAGCTGGAAGGGTTGGATGAAACTAAGGAGTATCTTGAAACTAGGAGAGCTATGGGTGTTGTTGGCATCAGCTCTGATGAGCAGGATGCCATATTTCGTATAGTGGCTGCAATACTTCACTTAGGAAACGTCGAATTTGCCAAGGCAGATGAGGTGGATTCCTCTAAACCTAAGGATGATCAATCTCGTTTTCATCTCAAAACTGCAGCTGAACTTTTCATGTGTGATGAGAAATCTCTTGAGGACTCTTTGTGCAAACGCGTTATTGCTACACGTGACGAGGCCATTACAAAATGTCTTGATCCGAACTCTGCTGTTCTAAGTAGAGATGCCTTGGCTAAGATAGTTTATTCAAGACTGTTTGACTGGATTGTGAACAAGATTAACGGCACCATTGGTCAAGATCCGGGTTCAAAGAACTTGATCGGGGTTCTGGATATTTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATTAATTTGACCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAAGAATATACGAAGGAAGAAATTAATTGGAGTTATATTGAGTTCATCGATAATCAGGATGTTCTTGATCTCATTGAGAAGGTTTGTGAATTATCTGCCTTTCTGTCTTTCTTGTCTTTTGCAGTATGTTTCCAAGATCAACACGAGACATTTGCTGAAAAACTATATCAAACTTTTAAAGACCATCATATATGCTTCAGCAAGCCGAAGTTGGCTCGTTCTGACTTCACCATTGCCATTATGCTGGTGATGTATGTCACTTATCAAACTGAGTTGTTCCTTGATAAGAACAAAGACCATGTTGTTCCGGAGCACGAGGCACTGCTTAGTGCTTCTAAGTGCTCCTTTGTTGCAGGGTTGTTCCCTCCTTTACCTGAGGAATCTTCCAAATCATCCAAGTTCTCTTCAATAGGCACCAAATTTAAGCAACAACTGCAAGCTTTGCTTGAAACTCTGAGTGCTACTGAGCCACAATACGTTCGTTGTATAAAGCCAAATAATCTTCTTAAGCCAGGGATATTTACTAATTGTACTGTGTTGCAGCAGCTTCAATGTGGGGGAGTCATGGAGGCAATTAGGATAAGCTGTGCTGGATATCCCACAAGAAAGATCTTTAGTGAATTTATTCGTCGTTTTAGTATTTTGTCACTTGAGGTTCTACAGGAATGCCCTGATGAGGTGGCTGGTTGCAAGAGGTTTCTAGAGAAAGTGAACCTGAAAGGCTATCAGATTGGCAAGACAAAAGTGTTTCTGAGAGCAGGTCAGATGGAAGAACTAGATGCATTTCGAGCCGAGGTCTTAGGAAGATCAGCAACCATTATTCAGAGGAGAGTTCGCACATGTTATTGA	2295	0.4122	MMELLMSFLNEQAAQVNYIVGSHVWVQDPEVAWIDGEIVEVNGAEIKINSTSGKSVVAKSSNIYPKDPEFPPSGVEDMTRLAYLHEPGVLQNLQCRYDIDEIYTYTGSILIAVNPFRRIPHLYASDMMERYKGAALGELSPHPFAIADTAYRMMINEGASQSILVSGESGAGKTESTKLLMQYLAFMGGRSGSEGRSVEQQVLQSNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEVVDSYKLGNPRTFHYLNQSNFYELEGLDETKEYLETRRAMGVVGISSDEQDAIFRIVAAILHLGNVEFAKADEVDSSKPKDDQSRFHLKTAAELFMCDEKSLEDSLCKRVIATRDEAITKCLDPNSAVLSRDALAKIVYSRLFDWIVNKINGTIGQDPGSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKVCELSAFLSFLSFAVCFQDQHETFAEKLYQTFKDHHICFSKPKLARSDFTIAIMLVMYVTYQTELFLDKNKDHVVPEHEALLSASKCSFVAGLFPPLPEESSKSSKFSSIGTKFKQQLQALLETLSATEPQYVRCIKPNNLLKPGIFTNCTVLQQLQCGGVMEAIRISCAGYPTRKIFSEFIRRFSILSLEVLQECPDEVAGCKRFLEKVNLKGYQIGKTKVFLRAGQMEELDAFRAEVLGRSATIIQRRVRTCY	764

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g01665	764	Gene3D	-	680	764	-	-
	Bach5g01665	764	FunFam	Myosin 2	323	436	-	-
	Bach5g01665	764	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	49	763	IPR027417	-
	Bach5g01665	764	CDD	MYSc_Myo11	87	734	IPR036018	-
	Bach5g01665	764	Gene3D	-	263	321	-	-
	Bach5g01665	764	ProSiteProfiles	Myosin motor domain profile.	73	746	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Bach5g01665	764	Pfam	Myosin N-terminal SH3-like domain	20	63	IPR004009	GO:0003774\|GO:0005524\|GO:0016459
	Bach5g01665	764	Gene3D	-	450	637	-	-
	Bach5g01665	764	PANTHER	MYOSIN	65	762	-	-
	Bach5g01665	764	FunFam	Myosin heavy chain	263	318	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g01665	Bach-Chr5	16010307	16034355	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g01665	13	762	Myosins gene family	AT1G04600	75.499	0.0	1185

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g01665	K10357		-	qsa:O6P43_003112	1177.93

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