Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01642 ATGGACGCCGAACAACCAATTAGCTCTTCTAATCCTCGGCAGAGAAAGCCCAAGAGGAAACGAACTCAGCAAGATGCAGAACTTGAAGGATTGGATTCACTACCATGGAACTCCTCTCTTCCTGACGATAACCCTTTTTCTATGGTTATTGGCTCGAATGAACTTGAAGGAGGTTTTCTTTCACTTGAAGAGATTGATGAATCTGACTATAATTTGGGAATTCCTAAACCTGAAGAAAGCAAGAAGAAGAAGTCTAAACAGAATACAGATTCAAAGAAACAGAAGAAAGGCCAAGCCGACGCCCCTTGTGGTGATATTGTTGAAGCCAAGTTTGAAGGAGAAGTGGTGAAGGATGAGGATGTGAAGTCTAAAATGAAGAAAAAAAAGAAGAAAAAGAAGGAAGCTGGAGAAAAACAGAAAGTAGAGGCACCTGCTTCTGACACAGTTCATGACTCAAAGGATGATATTGAGGAAGGGGACGTTGACGAGCCTGAATTTTATGCTTGGAACGAGTTGAGGCTTCATCCTCTGCTGATGAAAGCAATATATGAGCTAGGCTTCAAAGAACCAACACCAATACAGAGAGCTTGTATTCCAGCTGCTGCTCATCAAGGGAAGGATGTTGTTGGGGCTGCAGAGACAGGATCTGGGAAGACACTTGCATTTGGTTTACCTATTCTGCAACGCCTTTTGGATGAGCGAGAAAAGGCTACAAAGATGCATGAAGAAAGGGGTGAAGAACCAGAAAAGTATGCTTTTTCAAGCCTTTTGAGGGCTCTAATTATTACTCCAACTAGGGAACTTGCAATTCAGATCACTGATCATCTGAAAGCAGTAGCCAAGCATCTGAATGTTAGGGTGACACCTATAGTTGGGGGAATTTTGAGCGAAAAGCAGGAGAGACTTTTAAAGGCAAGGCCTGAGATTATTGTTGGAACACCAGGGAGGTTATGGGAACTTATGTCAGCTGGAGAAAAGCATCTCATCGAGTTACACTCATTGTCTTTCTTTGTGCTTGATGAGGCTGATCGAATGATACAAAGTGGGCATTTTAAAGAGTTGCAATCAATAATTGATATGCTACCCATGTCCAATGTCTCTGTTGTAGATAATCCTCAAAATCCACAAAATTGTACTACAGTTTCAAGCTACCAAAGAAAGAAAAGACAAACTCTCGTTTTTTCAGCAACTGTCGCACTATCTGCTGATTTCCGCAAGAAGCTAAAGCGTGGTTCTACAAAACCAAAGCAACATATGTCTGATGGATTCAATTCTATTGAAACTCTTTCTGAACGAGCAGGAATGAGAGCCAATGCTGCAATCATTGATCTAACTAATCCATCGATATTAGCAGCTAAGCTTGAGGAATCATTTATTGAATGCAAGGAAGAAGATAAAGATGCATATTTGTATTACATTTTGACTGTTCATGGGCAAGGTCGCACAATAGTGTTTTGTACATCAATTGCAGCTTTGCGCCATATCTCTTCTCTACTGCGCATTCTTGGCATCAATGTTTGGACTCTTCATGCCCAAATGCAGCAGCGAGCACGTTTAAAGGCCATTGATCGCTTTCGTGAAGATGAAAATGGCATTCTTGTAGCCACTGATGTTGCAGCTAGGGGTCTTGATATTCCTGATGTTAGAACTGTTGTCCACTATCAGCTTCCACATTCAGCAGAAGTATATGTTCATAGAAGTGGAAGAACAGCGAGAGCTTCTGCTGAAGGGTGCAGCATTGCTTTGATCTCACCTAGAGATACATCAAAATTTGCTTCATTGTGCAAGTCATTTTCTAAGGATAATTTTCAGCGGTTTCCTTTAGAGAGCACATACATGCCAGAGGTCCTTAAACGCTTGTCTCTTGCACGTCAAATAGACAGGATAGTAAGAAAGGGTTCCCAGGAGAAGGCAAAGAAAAATTGGTTTGAAAGGAATGCTGAATCAGTAGAACTAGTGACAGAGAATTATGACAGTGAAGAGGAAAGAGTGAACAAACATAAGCAAATGAAAGCAAGCTCAATAAAATTGAAGACATTGCAAGAGGAGCTCAATGTGCTGCTGTCACATCCTTTACAATCGAAAACATTTTCACATCGTTATTTAGCGGGGGCTGGTGTCACACCTCTCATGCAGGAACAGTTCCAACAACTAGCCAGGCAAAAACAAGGTGATTACCAAAGTTCAGGAGCTAATAAAAAGGGAAAATTGGTTGTGATTGGTCAGGATTGTGTGGAAGCACTTCAAGCGCTGCGGAGTGCCGGCGAAGAGGTGAAAATGGATCTTAAAGATATGGCAGAGAAACGCAGAAACATGGAGAATTCAAGAAGAAAGAGAAAGGAAGAGAAGAAACGCTTGCGTGAACAGCGGAGAAAGCAGAGGAGAAAACTTAAACATAAAGGGGACGATGAATAG 2415 0.4161 MDAEQPISSSNPRQRKPKRKRTQQDAELEGLDSLPWNSSLPDDNPFSMVIGSNELEGGFLSLEEIDESDYNLGIPKPEESKKKKSKQNTDSKKQKKGQADAPCGDIVEAKFEGEVVKDEDVKSKMKKKKKKKKEAGEKQKVEAPASDTVHDSKDDIEEGDVDEPEFYAWNELRLHPLLMKAIYELGFKEPTPIQRACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKATKMHEERGEEPEKYAFSSLLRALIITPTRELAIQITDHLKAVAKHLNVRVTPIVGGILSEKQERLLKARPEIIVGTPGRLWELMSAGEKHLIELHSLSFFVLDEADRMIQSGHFKELQSIIDMLPMSNVSVVDNPQNPQNCTTVSSYQRKKRQTLVFSATVALSADFRKKLKRGSTKPKQHMSDGFNSIETLSERAGMRANAAIIDLTNPSILAAKLEESFIECKEEDKDAYLYYILTVHGQGRTIVFCTSIAALRHISSLLRILGINVWTLHAQMQQRARLKAIDRFREDENGILVATDVAARGLDIPDVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPRDTSKFASLCKSFSKDNFQRFPLESTYMPEVLKRLSLARQIDRIVRKGSQEKAKKNWFERNAESVELVTENYDSEEERVNKHKQMKASSIKLKTLQEELNVLLSHPLQSKTFSHRYLAGAGVTPLMQEQFQQLARQKQGDYQSSGANKKGKLVVIGQDCVEALQALRSAGEEVKMDLKDMAEKRRNMENSRRKRKEEKKRLREQRRKQRRKLKHKGDDE 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01642 804 Coils Coil 762 800 - -
Bach5g01642 804 PANTHER RNA HELICASE 95 768 - -
Bach5g01642 804 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 167 195 IPR014014 GO:0003724
Bach5g01642 804 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 199 416 IPR014001 -
Bach5g01642 804 SMART helicmild6 493 574 IPR001650 -
Bach5g01642 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 362 IPR027417 -
Bach5g01642 804 Pfam Helicase conserved C-terminal domain 465 573 IPR001650 -
Bach5g01642 804 MobiDBLite consensus disorder prediction 69 99 - -
Bach5g01642 804 MobiDBLite consensus disorder prediction 119 159 - -
Bach5g01642 804 MobiDBLite consensus disorder prediction 762 804 - -
Bach5g01642 804 Pfam DEAD/DEAH box helicase 191 399 IPR011545 GO:0003676|GO:0005524
Bach5g01642 804 MobiDBLite consensus disorder prediction 762 779 - -
Bach5g01642 804 CDD DEADc_DDX24 178 443 - -
Bach5g01642 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 258 589 IPR027417 -
Bach5g01642 804 MobiDBLite consensus disorder prediction 135 155 - -
Bach5g01642 804 MobiDBLite consensus disorder prediction 1 51 - -
Bach5g01642 804 Coils Coil 650 670 - -
Bach5g01642 804 MobiDBLite consensus disorder prediction 69 101 - -
Bach5g01642 804 Gene3D - 120 417 IPR027417 -
Bach5g01642 804 SMART ultradead3 186 419 IPR014001 -
Bach5g01642 804 MobiDBLite consensus disorder prediction 780 797 - -
Bach5g01642 804 CDD SF2_C_DEAD 454 583 - -
Bach5g01642 804 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 338 346 IPR000629 -
Bach5g01642 804 Gene3D - 450 688 IPR027417 -
Bach5g01642 804 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 453 614 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01642 Bach-Chr5 14966768 14977020 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01642 168 614 Eukaryotic Initiation Factors Gene Family AT5G11200 28.238 6.15e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01642 K14805 - gmx:100806018 1149.04