Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01629 ATGTATTGGGGAGTGATGGCAGCAGGCTATATGGGCTGGGGTATAATAGAGGAAGAGGGTTGGAGGAAAGGTCCTTGGACTGCAGAAGAGGACAGATTGCTCATTGAATATGTTAGGGTACATGGTGAAGGTCGATGGAACTCTGTTGCTAGGCTTGCAGGATTGAAGAGGAATGGGAAGAGCTGCAGATTGAGGTGGGTGAATTATCTGAGACCAGACCTGAAGAGGGGTCAGATAACACCACAAGAAGAGAGCGTAATTCTAGAGTTGCATTCCAGATGGGGAAATAGGTGGTCAACAATTGCAAGAAGCTTGCCGGGAAGAACTGACAATGAGATAAAGAATTATTGGAGGACCCATTTCAAGAAAAAATCCAAGAATCCCTCTGATGCTGCAGAAAAGGCGAAAAATCGCCTTCTGAGGAGGCAGCAATTCCACCAGCAACAGCAGCAGCAGCAGCAGCAACAGTTCAGCTTGGACATGAAGAGCATCATGGCTTTGCTTGAGGACAATGAGCACAAAGTTCCATCTTTCCCTCAAGTGAGGCAAGAAGTGACCAATCTTTACCCAAACACCACCACAGAAGAGCAAGGCTACTTCTATTCTCTTCTCAGTGGCAATGCCTCTGTGCCTGAGGCCTCAAATGAAGAAGTTCTGTGGGATGGATTGTGGAACTTAGATGACTTTCATGGGAATTTAGCAGCAGCTACTGCTACAAACAAAGCCAATCTGCATAATTTAGTTGCGCCCTTCTGTTAA 759 0.4625 MYWGVMAAGYMGWGIIEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESVILELHSRWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKSKNPSDAAEKAKNRLLRRQQFHQQQQQQQQQQFSLDMKSIMALLEDNEHKVPSFPQVRQEVTNLYPNTTTEEQGYFYSLLSGNASVPEASNEEVLWDGLWNLDDFHGNLAAATATNKANLHNLVAPFC 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01629 252 Gene3D - 80 124 - -
Bach5g01629 252 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 175 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach5g01629 252 FunFam MYB transcription factor 80 159 - -
Bach5g01629 252 Gene3D - 23 75 - -
Bach5g01629 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Bach5g01629 252 SUPERFAMILY Homeodomain-like 20 117 IPR009057 -
Bach5g01629 252 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Bach5g01629 252 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Bach5g01629 252 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Bach5g01629 252 CDD SANT 80 121 IPR001005 -
Bach5g01629 252 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Bach5g01629 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Bach5g01629 252 FunFam Myb transcription factor 23 75 - -
Bach5g01629 252 SMART sant 75 123 IPR001005 -
Bach5g01629 252 SMART sant 22 72 IPR001005 -
Bach5g01629 252 CDD SANT 25 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01629 Bach-Chr5 14673068 14674167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01629 18 252 MYB Transcription Factor Family AT3G24310 59.846 8.32e-90 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g01629 Myb_DNA-binding 2.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01629 K09422 - gmx:100795981 389.423