Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01588 TTTCACTTCTTTGTCTCCATTTTCAACCTTAATTGCTCCATGACTCCGGGTTTACTTGGTGGTGGTGGTGGTGGTATTTCTTCTGGGGTTTCTACAACTGAATCAAAAGTGTCAAATGTGAAGTTAATGGGGCAAGATTACTTGACCATTTCTCCCTCTGAGGCATCTTCTTACAATGGTGAGGCTGAGCTTGAATTGGGTTTGGGTCTGAGCCTCGGTGGTGGTGGTGGGAAGGTGAAGGCTTCTGCATGGGGTGAGTGTGGTCGTATCTTGGTGGCTAAAGACTTTCCTTCTGGTGTTTCTCATGGTGCTGCTTCTCGCTTCTCAGACAGAGTTGGTGGCACTTCTATTGGGACTAAGAGAGCTGCTGAGTCTGTTTCTCAGGAAGGTGGATCTCCAACTGTTGGCAGTCAAGTTGTTGGATGGCCACCTATAAGGACATATAGGATGAACAATTTGATTAACCAAGCAAAGACTCAGAGGGCTGAAGAAGACAAATCAAGTGGTGAGAGGGATAATCCTAAAGATGATTCAATTGCCAAAACCAACAACATGGCTGTCAAAGAAAAGGCAAATCTTGGATTTCTGAAGGTGAACATGGATGGAATCCGAATCGGCAGAAAAGTGGACTTGAAGTCTCATTCAAGCTATGATACTTTAGCTCAAACACTGGAAGACATGTTTTTCAGGCCTGCAACTGCTGCTAATCAAGCTGGTGGAGAGAAAGAACAGGCAACAAAAGCATCTAAACTCTTAGATGGAACATCTGAATTTGTGCTCACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCTTGGAGAATGTTCCTCACCTCAGTGAGAAGACTCCGGATCATGAGAACATCAGAGGCTAATGGACTTGCTCCAAGATTCCAAGAGAAAAGTGAGAAACAAAGAAATAAACCCATTTAGGATAATTTTTGTTTGCTTCGCGATGCGGCAGGATATAGAAAATCTACAGTTTGACAACAGAATGTTACAAGAAAATAGAGAAGATGATGAAAGAGCACTGTTTTGCTAAGATTTTGTCTTCCAATGGTTTTCGGTGTGTCTACTATGAGTTTTTTTTTCTTTTCAACCATTCCCTGGTTCTGGTGTCTACTCCATTTTCTTTTTCTTGGTAGAGAGCCTTGGTTATAGTCTACACAGCCCCTTATATACAATACAGGCCCTGCATACTTGACTGAAGGCTTCCTTTTCATACTGTAAATAGTGGAGTACTGAATATCTAGAGTGTCAAGTTTTCTGTAGATGTACTGGAGTAAGCTACTAAGCAATTTCTTTGGTGACAGAAGAAAAAACTGTTGTTTCTATTACTGTTGATCTCATTTGTTCTTCTTTGGTTTGGACATGTTTCAAAGTGTTGTTATT 1404 0.4145 MTPGLLGGGGGGISSGVSTTESKVSNVKLMGQDYLTISPSEASSYNGEAELELGLGLSLGGGGGKVKASAWGECGRILVAKDFPSGVSHGAASRFSDRVGGTSIGTKRAAESVSQEGGSPTVGSQVVGWPPIRTYRMNNLINQAKTQRAEEDKSSGERDNPKDDSIAKTNNMAVKEKANLGFLKVNMDGIRIGRKVDLKSHSSYDTLAQTLEDMFFRPATAANQAGGEKEQATKASKLLDGTSEFVLTYEDKEGDWMLVGDVPWRMFLTSVRRLRIMRTSEANGLAPRFQEKSEKQRNKPI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01588 301 Gene3D - 175 291 - -
Bach5g01588 301 MobiDBLite consensus disorder prediction 146 165 - -
Bach5g01588 301 ProSiteProfiles PB1 domain profile. 180 281 IPR000270 GO:0005515
Bach5g01588 301 FunFam Auxin-responsive protein 175 289 - -
Bach5g01588 301 MobiDBLite consensus disorder prediction 107 122 - -
Bach5g01588 301 MobiDBLite consensus disorder prediction 107 127 - -
Bach5g01588 301 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 50 284 IPR003311 GO:0005634|GO:0006355
Bach5g01588 301 SUPERFAMILY CAD & PB1 domains 182 277 - -
Bach5g01588 301 MobiDBLite consensus disorder prediction 144 171 - -
Bach5g01588 301 Pfam AUX/IAA family 101 288 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01588 Bach-Chr5 13821887 13824507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01588 184 288 B3 DNA Binding Superfamily AT1G59750 34.286 8.42e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach5g01588 AUX_IAA 5.7e-63 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01588 K14484 - qsa:O6P43_003143 386.726