Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01572 ATGACATCAACACAAAGGAAAAAGATTGCAGCCGCCTGCAAGTACATGAAGCAACTTGGCTTCTCCAGAGGCCAAGTGAATCCAAAACTGAAAGAACTTTTACGGTTGTATCAAAATCAGTGGGAGTTTATTGAAGAAGAGAACTATAAAGTTCTGGTGGATGCTTTACTGCTGGACGACGAGCAACATGATAAGATGTGTTTATATCTTGTACTCATTTCCATTTCTCTTTGCCAGAGGATAGAATCTGATAAGAAAGAAACTGGATCAACCTCCAAAAACAAGGAAGTAAAAAGTAAGGAAGACGCCCCTTTACAATGTGAATCTTCTGCCTCTCCAGTTCAAAAGAAGAGATTGAGGCCTAGGGATCAGAATGGACGGGTTGTCAGATCCCAGTTGGTTTTGGGAAGAGAAGAGAATGTGTTGTATTCAGACTCGTCAGATGAAGAAAGCTTGCCTCTCATCAAAAGGAAAACTGTAAGAAAACATATAGAACAGGATGGGTTTGAAGATGAAGATAAATTATCTACAAGTGAAAACTGTGAGCCTCCGACAAACAGAGTGCATAATTCATGCTCTGACAACTCTAGTCCACTGTTGGTCAACATGTCATTAAAAATTGCAAGAGATGGGATTGAATTGCCTAAAACTTGTTGCTTAGAGGAGGCCCCTGAGCCAGTTCTGTACATAGAATTACCATATGAACAAAATGAGTCGAAGCCTGATTCACCCCTGCAATCTCATCCTCATCTACCTCTAATTGACTCAAGTCATATGATAGCTGAGTCATCTCAAGAATATGCTAGTAGCAGCAAGAAATCAGTGGCATCTGAATCTTCTTACAGCAAGAAAAGTATCAACTCTGACAGAGAAGACAACGTGTTGTATCCAGGGAAGCAAAAGTTTGAGTCCTGCACAGACGTGATCTTGACAGAGAATGTTACTGATATGTATCAGAACAATTTAGAATTGGCCTGTGGCGAGCCATTCTCTACTGAACCACCATTGAATGTGGTTCCTCTTGCATTGATGTATCAAGATAATTCAAATGGGGACAATTCTGATGTTGTGGAAGATGAAATGAAGTTTTTGGAGTATGTTCATCTAAATGTCGATCATAATGTTGACAGTGTCTCAAGAATGACACAGTTTGATATTGCTTCTACTTCCAAGGGAGAGGTAAAAGTTTCTCTGATCTGTAGTCCCTCTGAGTCTCATTTCAATATCCCTAGTTTGGAGTCTGTTATCAAGGTTGTGGAAGATAAATACAAACGTTTCGAGATTGTAGATCAAAATTTCTCAGTGATGAAGCTCATGGAAAATGTTTGTGAATGTTTCATGGCAATGGCTACCCAATCTTCTGCTGAAAAACAATTGAATAGCTCTCCCCAGACAAAAAAATCTGATGCCCAAGAAACTCCAATCAAAATTCATTGTCCAAACAACTTATACAACCATCAAAGCAATTCAAGTTGTTTTCCCAAAATTCAGGATCTTGTCAAGATAGAACTTTCGGTTCCAAAGGGTGTAGCTCTTAGAGGTCTGGAAGGTCTACATTGCATTCGTGGTTTTGAGATACCAGATATTGTTGACATTCACTGCGTCAGGAAAAGGAGAATAAATGTTTTAATGGACACAAGGACCGATCATATGATTCATATAGATGACATAACTAGAGGTGAAGAAAGAATGAAAGTTTCCTTGGTACATTGTGGATCTTCTGAAGATTTGCCAACCTTTGTGTACATTCAAAACAATATGGTATACGATAAGGCGTATGTCAATTTTGCACTTGCTCGTATATCTGATGAAGAATGTTGTTCACATTGTTTTGGTGATTGTCTTTCATCTTCCATACCTTGTGAATGTACCCTTGAAACTGGGGGTGAGTTTGCTTACACATATGAGGGTTTGCTTGAGGAGAAATTTCTTGAGGAATGTATCTCCCTGAATCAGGATCCGAAAGCACACAATTTCTTTTTCTGTAAAGAGAGATGCCCACTAGAGATATCCAAGAACAAACAGGAAATCAACCGTTGTGAGGGACACCTAGTGAAAAAATTTATTAAGGAATGCTGGTCAAAATGTGGATGCAATAAAAACTGTGGCAACCGTGTTGTTCAGCGAGGCCTTACTGTGAACCTACAGGTGTTTCAAACACCTGAAGGGAAAGGATGGGGTCTCAGAACGCTTGAAAATTTGCCCAAAGGTGCTTTTGTTTTTGAGTATGTTGGGGAAATAGTAACCAACACAGAACTATATGAGCGAACTATGCAAAGCAGAGGTAATGACAAGCATACATATCCAGTACTGCTTGATGCAGATTGGGGTTCAGAAAAAGTTTTGACAGATGAAGAGGCCCTCTGCTTGGATGCAACTTTTTATGGAAATGTTGCTAGATTTCTCAATCACAGGTGTGGCGATGCAACCTTAATCGAGATCCCAGTTGAAATTGAGACACCAGACCATCACTACTATCATGTTGCTTTCTTCACAAAAAGGGAAGTAGCTGCTATGGAAGAGCTGACTTGGGATTATGGCATTGACTTCAATGACAAAGAGCACCCTGTAAGAGCATTCAAATGTCTTTGTGGCAGCCCATTGTGTCGTGACCTAAGCCAACCAAAAGAGGCAAAATCCCAATGCTTCATTTGA 2655 0.3985 MTSTQRKKIAAACKYMKQLGFSRGQVNPKLKELLRLYQNQWEFIEEENYKVLVDALLLDDEQHDKMCLYLVLISISLCQRIESDKKETGSTSKNKEVKSKEDAPLQCESSASPVQKKRLRPRDQNGRVVRSQLVLGREENVLYSDSSDEESLPLIKRKTVRKHIEQDGFEDEDKLSTSENCEPPTNRVHNSCSDNSSPLLVNMSLKIARDGIELPKTCCLEEAPEPVLYIELPYEQNESKPDSPLQSHPHLPLIDSSHMIAESSQEYASSSKKSVASESSYSKKSINSDREDNVLYPGKQKFESCTDVILTENVTDMYQNNLELACGEPFSTEPPLNVVPLALMYQDNSNGDNSDVVEDEMKFLEYVHLNVDHNVDSVSRMTQFDIASTSKGEVKVSLICSPSESHFNIPSLESVIKVVEDKYKRFEIVDQNFSVMKLMENVCECFMAMATQSSAEKQLNSSPQTKKSDAQETPIKIHCPNNLYNHQSNSSCFPKIQDLVKIELSVPKGVALRGLEGLHCIRGFEIPDIVDIHCVRKRRINVLMDTRTDHMIHIDDITRGEERMKVSLVHCGSSEDLPTFVYIQNNMVYDKAYVNFALARISDEECCSHCFGDCLSSSIPCECTLETGGEFAYTYEGLLEEKFLEECISLNQDPKAHNFFFCKERCPLEISKNKQEINRCEGHLVKKFIKECWSKCGCNKNCGNRVVQRGLTVNLQVFQTPEGKGWGLRTLENLPKGAFVFEYVGEIVTNTELYERTMQSRGNDKHTYPVLLDADWGSEKVLTDEEALCLDATFYGNVARFLNHRCGDATLIEIPVEIETPDHHYYHVAFFTKREVAAMEELTWDYGIDFNDKEHPVRAFKCLCGSPLCRDLSQPKEAKSQCFI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01572 884 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 8 878 - -
Bach5g01572 884 MobiDBLite consensus disorder prediction 262 283 - -
Bach5g01572 884 MobiDBLite consensus disorder prediction 168 193 - -
Bach5g01572 884 FunFam SET-domain containing protein lysine methyltransferase family protein 557 872 - -
Bach5g01572 884 Pfam Ubiquitin-binding WIYLD domain 5 61 IPR018848 -
Bach5g01572 884 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 881 IPR025776 -
Bach5g01572 884 SMART preset_2 554 697 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bach5g01572 884 Pfam SET domain 725 847 IPR001214 GO:0005515
Bach5g01572 884 Gene3D SET domain 557 872 IPR046341 -
Bach5g01572 884 CDD SET_SETDB-like 578 847 - -
Bach5g01572 884 Pfam Pre-SET motif 557 705 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bach5g01572 884 SUPERFAMILY SET domain 576 870 IPR046341 -
Bach5g01572 884 Gene3D - 1 62 IPR043017 -
Bach5g01572 884 ProSiteProfiles SET domain profile. 713 847 IPR001214 GO:0005515
Bach5g01572 884 MobiDBLite consensus disorder prediction 262 287 - -
Bach5g01572 884 SMART set_7 713 853 IPR001214 GO:0005515
Bach5g01572 884 MobiDBLite consensus disorder prediction 179 193 - -
Bach5g01572 884 MobiDBLite consensus disorder prediction 84 125 - -
Bach5g01572 884 ProSiteProfiles Pre-SET domain profile. 613 710 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bach5g01572 884 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01572 Bach-Chr5 13609661 13613981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01572 554 870 Su(var)3-9 homologs AT5G04940 27.596 3.47e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bach5g01572 Pre-SET 1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01572 - - qsu:111999549 681.789