Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01533 ATGGAAGGTGGCGCTAGTGAAAAGAGGCCAAGCTCTTCCCTTCCCAGGGAAACCGAGGGCCAGCCTGAGAATCATGCTCCTCCAGCTGCTGAAGACGATAAGATAAATATATACTTGAGGAGGGTGACAACAACACAAACGACTTCCAGAAAATCAGTAACAGTCTCAAGTCTCAAAGAGATACTAAGAATCCAGGGTGAAGTTCCTGAAAATTTTGAGCATCTGATCTTCTCCGGCGAAAAACTCCCGGAGACTCAAACACTTGATCAGTGTGGAGTCCAGAATGATTCAACCATTGACATGGTGATAGTTGACAGCGAAGATAGAATGAGGATCCATATAAAGTATCTCTTAATGCACAGAACAATCGTTTTGGAACCAAAAATAACTGACACAATCAAGAACATCAAGACCATGATCCAAACCCTGGAGAACTTGGAGCCAGAGATGTGCTGCCTCATCTACGAAGGGAAAATACTGAAAGATGAGAGCAGCTTAACCTCCCTCCAAGTGCCAAGCGGTTCTACATTTTGTCTTGTGACAGCTCCTAAGGAAAATTTCACACTTTATGTGAAGGAAAAAAATGGAGGAGACACCACAAAACTGGAAGTCAAGGCTACATTCAAAGTTCAAGATGTGAAAGCAGTGATTGGAAGTATGAAACACAAAGAAAAGAGTGAATGGCGGCTGGGACTCGCTGGAGAGCGGCTTCTGGAACACCGGAGCTTGGCCTACTATGGCGTCAAGGATGGATCAGTGTTGGACATGTACCATGGAAGATTTCAGGTGTTCGTGAAGACTTGGCATGGGAAAACCATCACTCTGCATGTGGACCAAGATGAGATTGTGCTGTTTATGAAGTTGGACTTCGTCCAAAAGATGAAGAAGCTGCTGAATGTGCCAAGGTACACTCGTCCTGTGAAGCTTGTTTATGGAGGCAAGGAACTGGTAGATCGTAAGAAGCTCTTAATCTACAACCTCCAAAGGGACTGCACAATTCGTGAATATTGA 1011 0.4451 MEGGASEKRPSSSLPRETEGQPENHAPPAAEDDKINIYLRRVTTTQTTSRKSVTVSSLKEILRIQGEVPENFEHLIFSGEKLPETQTLDQCGVQNDSTIDMVIVDSEDRMRIHIKYLLMHRTIVLEPKITDTIKNIKTMIQTLENLEPEMCCLIYEGKILKDESSLTSLQVPSGSTFCLVTAPKENFTLYVKEKNGGDTTKLEVKATFKVQDVKAVIGSMKHKEKSEWRLGLAGERLLEHRSLAYYGVKDGSVLDMYHGRFQVFVKTWHGKTITLHVDQDEIVLFMKLDFVQKMKKLLNVPRYTRPVKLVYGGKELVDRKKLLIYNLQRDCTIREY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01533 336 ProSiteProfiles Ubiquitin domain profile. 261 336 IPR000626 GO:0005515
Bach5g01533 336 PANTHER UBIQUITIN 110 185 - -
Bach5g01533 336 SMART ubq_7 35 104 IPR000626 GO:0005515
Bach5g01533 336 SMART ubq_7 189 259 IPR000626 GO:0005515
Bach5g01533 336 SMART ubq_7 110 182 IPR000626 GO:0005515
Bach5g01533 336 SMART ubq_7 261 334 IPR000626 GO:0005515
Bach5g01533 336 Pfam Ubiquitin family 112 182 IPR000626 GO:0005515
Bach5g01533 336 Pfam Ubiquitin family 191 256 IPR000626 GO:0005515
Bach5g01533 336 Pfam Ubiquitin family 263 333 IPR000626 GO:0005515
Bach5g01533 336 Pfam Ubiquitin family 48 103 IPR000626 GO:0005515
Bach5g01533 336 Gene3D - 187 257 - -
Bach5g01533 336 MobiDBLite consensus disorder prediction 1 34 - -
Bach5g01533 336 ProSiteProfiles Ubiquitin domain profile. 110 180 IPR000626 GO:0005515
Bach5g01533 336 PRINTS Ubiquitin signature 121 141 IPR019956 -
Bach5g01533 336 PRINTS Ubiquitin signature 142 162 IPR019956 -
Bach5g01533 336 SUPERFAMILY Ubiquitin-like 183 257 IPR029071 -
Bach5g01533 336 SUPERFAMILY Ubiquitin-like 258 333 IPR029071 -
Bach5g01533 336 SUPERFAMILY Ubiquitin-like 104 181 IPR029071 -
Bach5g01533 336 SUPERFAMILY Ubiquitin-like 18 103 IPR029071 -
Bach5g01533 336 ProSiteProfiles Ubiquitin domain profile. 187 256 IPR000626 GO:0005515
Bach5g01533 336 Gene3D - 104 186 - -
Bach5g01533 336 ProSiteProfiles Ubiquitin domain profile. 35 103 IPR000626 GO:0005515
Bach5g01533 336 Gene3D - 258 335 - -
Bach5g01533 336 Gene3D - 4 103 - -
Bach5g01533 336 CDD Ubl_ubiquitin_like 196 257 - -
Bach5g01533 336 CDD Ubl_ubiquitin_like 112 177 - -
Bach5g01533 336 CDD Ubl_ubiquitin_like 35 102 - -
Bach5g01533 336 CDD Ubl_ubiquitin_like 263 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01533 Bach-Chr5 12825095 12828279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01533 110 180 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 39.437 3.15e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01533 - - zju:107404106 182.57