Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01514 ATGGCAGATCCTGCAGCTAGTTATGGGAATCCTGAGCGTGATATCGAGCAAGCACTCATAACTTTGAAAAAAGGCACTCACTTACTTAAGTATAGTCGGCAAGGGAAGCCAAAGTTTCGCCCATTCAGACTCTCACCGGATGAAACAACACTGATCTGGATTTCTCATGGAGCAGAAAAAAGCCTAAAATTGTCTTCTGTTTCACGTATTATCCCAGGACAAAGAACTGCTGTCTTTAAGAGATATTTACGCCCTGAAAAGGATTATCTGTCATTTTCTCTTATTTATTATAACGGTGAACGATCACTTGATCTGATCTGCAAGGACAAAGCAGAGACAGAGGTATGGTTTGCAGCTCTTAAGGCATTAATTTCTGCCGGGCAGCACAACAGGCGTACTAGAAGTGAATTTTCTGATGATGGTTCCAGTGGACGCCCTTCTAGTGCAACACTAGAGTCTTCTTCAAGCATCAACCGTGGTAGAATCTCTGTTGATTCAGTTTCACGTGAATCTCTATTCTTTTTGGCAAGCTCAGATGTGGGGTCAAATATGCAACTAAGGGGTAGTTCTGTAGATGGTTTTCGTGTTAGTGTGTCAAGTACTCCTAGCTGTTCAAGTGGAGGATCCGGACCAGATGACATAGAGTCTCTAGGTGATGTTTATATATGGGGAGCGGTTTGGGTGGATGGGGTTTTACCTGATGGATTGGCCAGTCATGTTCCTTCTAAGACAGATGTGTTGGTTCCTAAGCCCTTGGAGTCAAATGTTGTTCTTGATGTTCAACAGATTGCTTCTGGTGTGCGCCACATTGCTCTAGTTACAAGGCAAGGAGAGGTATTTACATGGGGAGAAGAATCTGGGGGAAGACTTGGACATGGTATTGATAAAGATTTTGGTTGCCCCCGTCTCGTTGAGTCATTGGCAGTTACTAATGTGGAGTTTGTTGCATGTGGAGAATATCATACATGTGCTTTATCTAATTCTGGTGATCTGTTTACTTGGGGTGATGGTACCCATAATGCTGGACTTCTAGGCCATGGAACTGATGCTAGTCACTGGATACCTAAGAGGGTTACAGGCCCTTTAGAAGAACTTCAAGTTTTATCTATTGCTTGTGGAACATGGCACTCAGCATTGGCAACTTCCAATGGAAAGCTGTTCACATTTGGTGATGGAACATTTGGTGTCCTGGGCCATGGAGATCGGCAGAGTGTGTCACATCCAAAGGAGGTACAATTATTGAGTGGACTAAAGACAATTAAGGTTGCCTGTGGAGTATGGCACACTGCAGCTATTGTAGAGGTTATGGGTCAGTCTGGTTCAAGTTCTTCATCCAGGAAGCTCTTCACTTGGGGTGATGGTGACAAATATCGTTTGGGACATGGAAACAAGGAAACATACCTTCAGCCGACCTGTGTCTCTGCACTCATCGAATATGATTTTCACCAGGTTGCATGTGGACACACTATGACTGTTGCACTCACTACATCAGGTCATGTTTTTACCATGGGCAGCTCTTCTTATGGCCAATTAGGGAATCCTAACTCTGATGGAAAAGCTCCTATCTTAGTACAAGATAAGTTAGTTGGTGAATTTGTTGAGGAAATATCATGTGGAGCACATCATGTTGCTGTCTTGACATCAAGGAGTGAACTGTGTACTTGGGGAAAAGGTGAGAATGGAAGATTGGGACATGGAGACATAGAAGACCGTAAATCTCCAACTTTAGTCGAAGCCTTGAAAGATAGGCATGTAAAGAATATCTCATGTGGCTCAAACTTCACATCCTGTATATGCCTCCATAAATGGATTTCTGGAGTTGACCAATCTGTTTGCTCTGGTTGTCGTCAGGCATTCGGTTTTACTAGAAAAAGGCACAATTGTTATAATTGTGGATTGGTGCATTGCCATGCTTGTAGTTCCAGAAAAGCATATAAAGCAGCATTGGCTCCAACACCAGGCAAACCACATCGTGTGTGTGATGCTTGTTCTACAAAGCTTAAAGCTGCTGAGGCTGGTAGTGCTTCCACTTGTAACAGAAAAGTTACTCCTCCTCGCCGTTCCATAGATGGCAGTGTCAGGGAAAGATTAGACCGGGGAGAGATAAGATCTTCAAGAGTCCTCTTGCCTCCCATCACTGAACCAGTGAAATACCTTGAGACAAGGACAGGGAAGCCTGGAACTCGGTATGATTCTTCTATAGTTGGAGCTTCTCAAGTTCCATCACTTTTGCAATTAAAAGATATCGCTTTTCCAAGTTCATTGAGTGCTATTCAGAATGCTTTCAAGCCTGTTATACCTCCACCAAATCCACCAGTGGCACCGCCTGTGCAACCAAGACCTGCATCACCATACGCAAGACGACCAAGTCCACCACGTTCTGCCACTCCTGGATTTTCTAAAAGCCTTATTGACAGCTTGAGGAAGACAAATGACCTTTTGAACCAAGAAGTCTCGAAATTGCAAAACCAAATTCGAAGTCTAAAGCAGAAGAGTGACTTGCAAGATATAGAGATTCACAAGCTTCAGAAAAATGTTGAGGAAGCCAACACATTGACTGGAGAGGAAGCTTCTAAACATGGAGCAGCAAAGAGCTTTATCAAGTCCATCACTGATCAGTTGAAGGAAATTGTTGAGAAGTTGCCGCCAGATGTTTCAGATGATGAAAACTTGAGAACCATGTATGCTCAAGCCGAAGAGTTTCTAAAGAAAGATTCGGAATTAGAAGTATCTTCTTCTTTACCAGAAAACTTGGAGTCTGATCAACAAAATGTATCGGACATAACTGCCTCAGAGAGTGATGGAGGGAACATTCTTCAAGAAAGTAATACACCATCTGTATCTGATACAGAAGCAGCAATGCCTCCACATACACCATCTGTATCTACTACAGAAGCAGCAATGCCTCCACAAAGTGTAGAAAATGGTTCAAGATCACCACTTGACCCTTCAAGACCTAGTAGTAAGGGAGAAAACGAAATCGTCGAACCATTTGAATCTGGTGTTTATGTGATTCTCGTAGTACGTCCCAGTGGTAGCAAAGTTTTCAAACGAGTTAAATTCAGTAAGCGGAGGTTCGACGAACAACAGGCAGAAGAATGGTGGAATAAGAACAAAGATAAGGTGCTTAGGAGATATAGTCAATCATCATCAACAACAAATCCTGCAACTACTGCCTCATCTAGTGCCCCGACACCACCACCACCTGCTGAAGAAAATAATGAAGCATCACCTTCCAAAACTTAG 3246 0.4313 MADPAASYGNPERDIEQALITLKKGTHLLKYSRQGKPKFRPFRLSPDETTLIWISHGAEKSLKLSSVSRIIPGQRTAVFKRYLRPEKDYLSFSLIYYNGERSLDLICKDKAETEVWFAALKALISAGQHNRRTRSEFSDDGSSGRPSSATLESSSSINRGRISVDSVSRESLFFLASSDVGSNMQLRGSSVDGFRVSVSSTPSCSSGGSGPDDIESLGDVYIWGAVWVDGVLPDGLASHVPSKTDVLVPKPLESNVVLDVQQIASGVRHIALVTRQGEVFTWGEESGGRLGHGIDKDFGCPRLVESLAVTNVEFVACGEYHTCALSNSGDLFTWGDGTHNAGLLGHGTDASHWIPKRVTGPLEELQVLSIACGTWHSALATSNGKLFTFGDGTFGVLGHGDRQSVSHPKEVQLLSGLKTIKVACGVWHTAAIVEVMGQSGSSSSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSALIEYDFHQVACGHTMTVALTTSGHVFTMGSSSYGQLGNPNSDGKAPILVQDKLVGEFVEEISCGAHHVAVLTSRSELCTWGKGENGRLGHGDIEDRKSPTLVEALKDRHVKNISCGSNFTSCICLHKWISGVDQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSRKAYKAALAPTPGKPHRVCDACSTKLKAAEAGSASTCNRKVTPPRRSIDGSVRERLDRGEIRSSRVLLPPITEPVKYLETRTGKPGTRYDSSIVGASQVPSLLQLKDIAFPSSLSAIQNAFKPVIPPPNPPVAPPVQPRPASPYARRPSPPRSATPGFSKSLIDSLRKTNDLLNQEVSKLQNQIRSLKQKSDLQDIEIHKLQKNVEEANTLTGEEASKHGAAKSFIKSITDQLKEIVEKLPPDVSDDENLRTMYAQAEEFLKKDSELEVSSSLPENLESDQQNVSDITASESDGGNILQESNTPSVSDTEAAMPPHTPSVSTTEAAMPPQSVENGSRSPLDPSRPSSKGENEIVEPFESGVYVILVVRPSGSKVFKRVKFSKRRFDEQQAEEWWNKNKDKVLRRYSQSSSTTNPATTASSSAPTPPPPAEENNEASPSKT 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01514 1081 MobiDBLite consensus disorder prediction 769 800 - -
Bach5g01514 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 277 328 IPR000408 -
Bach5g01514 1081 Coils Coil 804 838 - -
Bach5g01514 1081 SUPERFAMILY PH domain-like 14 124 - -
Bach5g01514 1081 SUPERFAMILY FYVE/PHD zinc finger 602 669 IPR011011 -
Bach5g01514 1081 Pfam Transcription factor regulating root and shoot growth via Pin3 991 1046 IPR013591 -
Bach5g01514 1081 Pfam Transcription factor BRX N-terminal domain 855 887 IPR027988 -
Bach5g01514 1081 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 606 668 IPR017455 -
Bach5g01514 1081 Pfam Pleckstrin homology domain 16 124 IPR001849 -
Bach5g01514 1081 MobiDBLite consensus disorder prediction 133 154 - -
Bach5g01514 1081 SUPERFAMILY RCC1/BLIP-II 217 603 IPR009091 -
Bach5g01514 1081 CDD PH_PLC_plant-like 13 125 - -
Bach5g01514 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 328 379 IPR000408 -
Bach5g01514 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 552 598 IPR000408 -
Bach5g01514 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 497 546 IPR000408 -
Bach5g01514 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 383 432 IPR000408 -
Bach5g01514 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 448 494 IPR000408 -
Bach5g01514 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 277 325 IPR000408 -
Bach5g01514 1081 MobiDBLite consensus disorder prediction 1036 1081 - -
Bach5g01514 1081 SMART fyve_4 601 669 IPR000306 GO:0046872
Bach5g01514 1081 CDD FYVE_like_SF 612 663 - -
Bach5g01514 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 329 383 IPR000408 -
Bach5g01514 1081 FunFam PH, RCC1 and FYVE domains-containing protein 1 189 437 - -
Bach5g01514 1081 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 263 273 IPR000408 -
Bach5g01514 1081 MobiDBLite consensus disorder prediction 1045 1060 - -
Bach5g01514 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 446 497 IPR000408 -
Bach5g01514 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 550 601 IPR000408 -
Bach5g01514 1081 Pfam FYVE zinc finger 602 668 IPR000306 GO:0046872
Bach5g01514 1081 Gene3D - 443 603 IPR009091 -
Bach5g01514 1081 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 59 876 - -
Bach5g01514 1081 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 422 432 IPR000408 -
Bach5g01514 1081 MobiDBLite consensus disorder prediction 140 154 - -
Bach5g01514 1081 MobiDBLite consensus disorder prediction 928 996 - -
Bach5g01514 1081 Gene3D - 196 339 IPR009091 -
Bach5g01514 1081 Gene3D - 340 442 IPR009091 -
Bach5g01514 1081 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 605 679 IPR013083 -
Bach5g01514 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 498 549 IPR000408 -
Bach5g01514 1081 MobiDBLite consensus disorder prediction 928 986 - -
Bach5g01514 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 384 435 IPR000408 -
Bach5g01514 1081 ProSiteProfiles BRX domain profile. 992 1047 IPR013591 -
Bach5g01514 1081 PRINTS Chromosome condensation regulator RCC1 signature 329 345 IPR000408 -
Bach5g01514 1081 PRINTS Chromosome condensation regulator RCC1 signature 545 566 IPR000408 -
Bach5g01514 1081 PRINTS Chromosome condensation regulator RCC1 signature 370 386 IPR000408 -
Bach5g01514 1081 PRINTS Chromosome condensation regulator RCC1 signature 386 400 IPR000408 -
Bach5g01514 1081 PRINTS Chromosome condensation regulator RCC1 signature 279 295 IPR000408 -
Bach5g01514 1081 PRINTS Chromosome condensation regulator RCC1 signature 487 505 IPR000408 -
Bach5g01514 1081 MobiDBLite consensus disorder prediction 769 791 - -
Bach5g01514 1081 Gene3D - 14 133 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01514 Bach-Chr5 12603196 12609472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01514 990 1047 Major Intrinsic Protein MIP AT1G31880 36.207 9.49e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01514 - - qsa:O6P43_021414 1515.36