Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01502 ATGGGGAGAGCTCCTTGCTGTGAGAAGATGGGGTTGAAGAAGGGTCCTTGGACCCCTGAGGAAGATCAAATCTTGGTGTCTTATATTCAGAAACATGGCCATGGAAATTGGCGTGCTCTCCCAAAGCAAGCAGGGCTCCTGAGATGTGGCAAGAGCTGCAGATTACGTTGGATTAACTATCTAAGGCCAGATATCAAGAGAGGAAACTTCACCAGAGAAGAAGAGGAAACTATCATCAAGATGCATGAGAAGTTAGGCAACAGGTGGTCAGCAATTGCAGCAATGTTGCCAGGACGAACAGACAATGAAATCAAGAATGTGTGGCACACGCACCTGAAGAAGAAGCTGCTGAAAACGGACCAGCCCAATTCAGATACCAAGAAATGCTCCAAACGAAGAATTAAGCGTTCTGATTCCAATTCAAGCACAATAACTCAATCAGAACCAGCAAGCATTAATTTTCCAGAGAAGGAAACCTCTGTTTGCACTTCTTCCAGTGATTTCTCTTCTGTTGAGGAAAGCAAGAATATGGATATGATGACCATCAAGAGTGAAGATATTGAGTCTTTGGAGACAATAGTGCCTGAAAGTGATGAAAGCTTTTGGTCAGAAGTAGCAATGGATGATAGTCCCACTTCCACCATGCCACCATCTTTGACAATCTCAAATGAATTAGTAGTTCAAAACCCGTTTCAATCTGTGGAAACATTCCAACAGGATCATGGCTTTTCAGGCTTTCTTGACGACGGCATGGATTTCTGGTATGACTTGTTCATCAAAACAGAGGAATCAATGGAGTTACCAGTGTTCTGA 813 0.433 MGRAPCCEKMGLKKGPWTPEEDQILVSYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEETIIKMHEKLGNRWSAIAAMLPGRTDNEIKNVWHTHLKKKLLKTDQPNSDTKKCSKRRIKRSDSNSSTITQSEPASINFPEKETSVCTSSSDFSSVEESKNMDMMTIKSEDIESLETIVPESDESFWSEVAMDDSPTSTMPPSLTISNELVVQNPFQSVETFQQDHGFSGFLDDGMDFWYDLFIKTEESMELPVF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01502 270 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach5g01502 270 SMART sant 66 114 IPR001005 -
Bach5g01502 270 SMART sant 13 63 IPR001005 -
Bach5g01502 270 CDD SANT 69 112 IPR001005 -
Bach5g01502 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach5g01502 270 CDD SANT 16 61 IPR001005 -
Bach5g01502 270 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach5g01502 270 FunFam MYB-related transcription factor 13 66 - -
Bach5g01502 270 MobiDBLite consensus disorder prediction 116 159 - -
Bach5g01502 270 MobiDBLite consensus disorder prediction 139 159 - -
Bach5g01502 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach5g01502 270 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach5g01502 270 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach5g01502 270 Gene3D - 68 143 - -
Bach5g01502 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 210 - -
Bach5g01502 270 MobiDBLite consensus disorder prediction 116 138 - -
Bach5g01502 270 Gene3D - 13 66 - -
Bach5g01502 270 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01502 Bach-Chr5 12306266 12307888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01502 1 270 MYB Transcription Factor Family AT2G31180 49.275 8.16e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g01502 Myb_DNA-binding 6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01502 K09422 - gmx:100807569 361.303