Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01489 ATGGATCTTGCAGCCAATAGATATTTGATCCATGTCTCCTCACATGGGTCACAATCTCTCTCTCCCATGACAAATCCAGAAAGCTCAATCTTGTATCCTCGTTTTCATTCTTCTTCTTCTACCAGTTTTCCCATTATTGTCATTGCTGTTATAGGCATAATTGCCACAGCTTTCTTGCTTGTGAGTTATTATATCTTTGTGATCAAATGTTGTCTCAGTTGGCACCGCATTGATCTTCTAAGACGGTTTTCACCATCACTCCGCCGTGAAGAGCCACCGGGGATCTACTCTCAGGGGACGGAGCTCCGGGGGCTCGAGGAGGCTGTGATTAGATTGATTCCAGTGATTCAATACAAGACAGAGGAAAACAGAGATATCAGTGAGTGTTCTGTTTGCTTGAACGAGTTTCAAGAGGATGAGAAGCTGAGAAAGATACCAAATTGTAGCCATTTTTTCCATATTGATTGCATAGATGTTTGGCTTCAAAACAATGCCAATTGCCCACTTTGCAGAACAAGCATTTCCTTCACAAACAGGTTCCAAATTGATCAGATTCTCAATCTAAGGCCTTCAACCCAAGATAGGGGAGGCCCATATAGTGAAAATCTTATTGGTGGGGATGAAGATTTTGTGGTGATTGAACTGGGAAATGATCATGATAGAGAACAAAACTTGCAAGGGACCCACGAGAGAGCCAATGCATTGGAGTTACCAACAGCAAGGCCTCCAATTAGCCCTTCACCAAGGAAATTAGAGCAGAGGATTGTGCAGAAGAAAGCAAGGAAGTTGCAGAAAGTGACAAGCATGGGTGATGAGTGTATTGATATTAGAGCAAAAGATGATCAATTTTCAGTTCAACCGATTAGGAGGTCTTTCTCTATGGACTCCTCAGGGGACAGACAATTCTATTTGGCAGTTCAAGAGGCTCTGCAACAGCAGCAGGAGCAGCAGAACAGGCAAGTCAATGAGCTGGGCTCCATTGAAGGGTCCAGTGGTAGAGTTAAAAGGTCATTCTTTTCATTTGGACATGGTAGTAGATCTAGAAGTGCAGTGTTACCTGTTTATTTGGACCCATAG 1077 0.4318 MDLAANRYLIHVSSHGSQSLSPMTNPESSILYPRFHSSSSTSFPIIVIAVIGIIATAFLLVSYYIFVIKCCLSWHRIDLLRRFSPSLRREEPPGIYSQGTELRGLEEAVIRLIPVIQYKTEENRDISECSVCLNEFQEDEKLRKIPNCSHFFHIDCIDVWLQNNANCPLCRTSISFTNRFQIDQILNLRPSTQDRGGPYSENLIGGDEDFVVIELGNDHDREQNLQGTHERANALELPTARPPISPSPRKLEQRIVQKKARKLQKVTSMGDECIDIRAKDDQFSVQPIRRSFSMDSSGDRQFYLAVQEALQQQQEQQNRQVNELGSIEGSSGRVKRSFFSFGHGSRSRSAVLPVYLDP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01489 358 CDD RING-H2_EL5-like 128 171 - -
Bach5g01489 358 SUPERFAMILY RING/U-box 118 177 - -
Bach5g01489 358 PANTHER RING-H2 FINGER PROTEIN ATL16 27 354 IPR044600 GO:0016567|GO:0016740
Bach5g01489 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 176 IPR013083 -
Bach5g01489 358 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Bach5g01489 358 SMART ring_2 129 170 IPR001841 -
Bach5g01489 358 Pfam Ring finger domain 128 171 IPR001841 -
Bach5g01489 358 FunFam E3 ubiquitin-protein ligase ATL6 95 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01489 Bach-Chr5 12004256 12005332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01489 31 358 C3H Transcription Factor Family AT1G04360 52.222 5.51e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01489 - - gmx:100775286 486.108