Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01486 ATGCAAATTCCGAGTCTGCAAAGAGCAGGGTTCGGTGGAGCTCAAAATCGAATGAATCCCGGAGAAGGTTGGGTGGATCCCTTGAAAGATTGGGATTTTCTCGATGAAATTTTCGTCGATGATAAACATCCGCCCACAGATTTTGCTTGGCACAATCAAATTCCCAGTGTAAGCACGGAGATTGACTTTTCTGCAGGTACTGTAGCTTCTCAAGAGAGCACCCGAAAGAGGGGACGAACGGCTAATTCATGCAGCAAGCCAGGATCAAAAGCTTTCCGTGAGAAAGAGCGGAGGGAGAAGCTCAATGACAGGTTTGCTGACTTGAGCTCCGTTTTGGAACCTGGAAGATCTGTGAAAACTGATAAACCAGCTATACTTGATGATGCTATCAGAGTCCTGAACCAACTTAAAACTGAAACTCAGGAACTCAAAGAAACCAATGAAAAGTTGTTAGATGAAATAAAGTGTTTGAAGGCAGAGAAAAATGAGCTTCGTGAAGAGAAACTTGTTATAAAAACAGATAAAGAGAAGATTGAGAGGCAGTTGAAAGCTATGCCGGTTTCACATGCAGGGTTTATGCCGCCCCATGCAACTGCATATCCAGCTGGGGTCAACAAGATGACTGTTTTTCCCAGCTATGGTTTCATCCCGTGGCATTATATGCCTCTAGCTGCTCGTGATACTTCACATGATCATGAACTCAGGCCTCCTGCTGCATAG 720 0.4458 MQIPSLQRAGFGGAQNRMNPGEGWVDPLKDWDFLDEIFVDDKHPPTDFAWHNQIPSVSTEIDFSAGTVASQESTRKRGRTANSCSKPGSKAFREKERREKLNDRFADLSSVLEPGRSVKTDKPAILDDAIRVLNQLKTETQELKETNEKLLDEIKCLKAEKNELREEKLVIKTDKEKIERQLKAMPVSHAGFMPPHATAYPAGVNKMTVFPSYGFIPWHYMPLAARDTSHDHELRPPAA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01486 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 85 136 IPR011598 GO:0046983
Bach5g01486 239 SMART finulus 91 142 IPR011598 GO:0046983
Bach5g01486 239 FunFam Transcription factor bHLH104 88 169 - -
Bach5g01486 239 Pfam Helix-loop-helix DNA-binding domain 90 136 IPR011598 GO:0046983
Bach5g01486 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 88 150 IPR036638 GO:0046983
Bach5g01486 239 Coils Coil 126 181 - -
Bach5g01486 239 PANTHER BHLH TRANSCRIPTION FACTOR 30 239 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Bach5g01486 239 MobiDBLite consensus disorder prediction 1 22 - -
Bach5g01486 239 CDD bHLH_AtILR3_like 90 165 - -
Bach5g01486 239 Gene3D - 88 169 IPR036638 GO:0046983
Bach5g01486 239 MobiDBLite consensus disorder prediction 68 87 - -
Bach5g01486 239 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01486 Bach-Chr5 11986680 11989662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01486 72 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 65.089 1.25e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g01486 HLH 6.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01486 - - qsa:O6P43_003232 296.204