LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g01446	GCATGTGATTGTGCTTGGGAATGGTTAGAGATGGCTCGGGACGGGAGTGTTGTCCCGGTGGACCCTCAGGCTCTTGTTGGTGTGAAGAAGAAGACACAATCGTCAAGGAGTTGGATTATATTGAATGCTATGGGGGAAGGTTCGATTTTGGATGCAGACAAATATGCCATTATGCATAGAGTTGATATTCATGCTCGTGATCTTCGGATCCTTGATCCTTTGCTATCCTACCCATCTACGATACTCGGTCGTGAAAAGGCTATTGTTCTGAACTTAGAGCATATCAAAGCAATTATCACTTCTGAAGAGGTATTGCTGCGAGATCCAACAGACGAACATGTGATCCCTGTTGTTCAGGAGCTCCAAAGGCGATTGCCTCCCTTAAGCTCAGTTCAGCAACGTAATCCTGGTGGTCAACAGGACCTTGAAGCTGCTGAAGAAGAAGATGAGTCTCCCTTTGAATTCCGGGCTCTGGAGGTAGCTTTGGAGGCTATTTGTAGTTTCCTTGCTGCACGTACAACAGAATTGGAGACAGCTGCTTATCCTGCACTAGATGAGCTTACCTCCAAGATTAGTAGTCGTAATTTGGATAGAGTTCGTAAGATCAAGAGTGCAATGACAAGGCTGACAGCTAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAACTCCTGGATGATGACGATGACATGGCTGACCTTTACTTGTCTAGAAAGTTGGCTGGCATATCTTCACCAGTGAGTGGATCAGGTGTTGCCAATTGGCTTCCTGGATCCCCCACTATAGCCTCAAAGATATCCAGAGCAAGTAGAGCTAGTATGGTGACAAATCATGGAGATGAAAATGATGTGGAGGAGCTTGAAATGTTGCTGGAGGCTTATTTCATGCAAATTGACGGCACATTGAACAAATTAAGCACACTACGTGAGTATATTGATGATACAGAAGATTACATTAATATTCAGCTTGACAATCATCGAAATCAGCTGATCCAGTTAGAGCTCTTTCTTAGTTCAGGAACTGTTTGTCTGGCCTTCTATTCTTTGGTGGCTGGAATATTTGGCATGAATATCCCATATACGTGGAATGATGATCATAGTTACATGTTCAAATGGGTGGTTATTTTTACAGGAGCAGTTTCTGCAGTATCTTTCGTCTTAATTATGATCTATGCTCGCAAAAAAGGGTTGGTGGGATCGTGAAAAGTTACATAAATTTGAAGGGAATGGGTTCGCAGAATGAAATCTATGACTCCTAATTATGGAATCTGACAAGTGATGCTGCAGAAATTTTAATTATAGGTAGGTCTGTTTTATATGAAAAAGCATCTAATAAGAACTAGCTTCTC	1346	0.4242	MARDGSVVPVDPQALVGVKKKTQSSRSWIILNAMGEGSILDADKYAIMHRVDIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITSEEVLLRDPTDEHVIPVVQELQRRLPPLSSVQQRNPGGQQDLEAAEEEDESPFEFRALEVALEAICSFLAARTTELETAAYPALDELTSKISSRNLDRVRKIKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLAGISSPVSGSGVANWLPGSPTIASKISRASRASMVTNHGDENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLAFYSLVAGIFGMNIPYTWNDDHSYMFKWVVIFTGAVSAVSFVLIMIYARKKGLVGS	389

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g01446	389	Coils	Coil	189	216	-	-
	Bach5g01446	389	FunFam	Magnesium transporter MRS2-1	16	99	-	-
	Bach5g01446	389	Pfam	CorA-like Mg2+ transporter protein	274	377	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Bach5g01446	389	Gene3D	Magnesium transport protein CorA, transmembrane region	104	319	-	-
	Bach5g01446	389	MobiDBLite	consensus disorder prediction	116	138	-	-
	Bach5g01446	389	Gene3D	-	14	99	-	-
	Bach5g01446	389	CDD	Mrs2_Mfm1p-like	28	386	IPR039204	-
	Bach5g01446	389	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	16	387	IPR039204	-
	Bach5g01446	389	Gene3D	Magnesium transport protein CorA, transmembrane region	326	386	-	-
	Bach5g01446	389	SUPERFAMILY	Magnesium transport protein CorA, transmembrane region	325	377	IPR045863	-

Showing 1 to 10 of 10 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g01446	Bach-Chr5	11472354	11476113	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g01446	1	362	MRS2 Gene Family	AT5G64560	77.989	0.0	522

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g01446	K16075		-	qsa:O6P43_003283	595.89

Showing 1 to 1 of 1 entries