Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01444 ATGGCAACTTTGCTTGGTGAGAAGCATGATTTGAATCTGAAGGAGACTGAGTTGTGCTTGGGGTTGCCTGGCGGCGGCGGCGTTGGAACTGATCAGGTGGAGACCCCGAGGACCACTGGAAAGAGAGGGTTCTCTGAGACTGTTGATCTCAAGCTCAATCTTCAATTCAAGGAAGATCTGAGTGAGAATTTGAAGAATACCTCAAAGGAGAAGAGCCTTCTTAAGGACCCTGCTAAGCCCCCAGCCAAGGCTCAAGTGGTGGGTTGGCCACCAGTGCGTTCGTACAGGAAGAACGCAATGGCACAGAAAGGTAACAGTGAAGAAGGGAATAGTAGTGAGAAGAATACAAGCAGCAGCGGCAGCCCTACTTCTGGAGGAGCATTTGTGAAGGTTTGCATGGATGGAGCACCCTACCTTCGTAAGGTGGACTTGAGAATGTACAAAAGCTACCAAGAACTATCTGATGCCTTGGCCAAGATGTTCAGTTCCTTCACCATGGGTGAATATGGGACCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAATATGTGCCAACCTATGAAGATAAGGATGGCGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGAGTCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAAGCTATTGGACTTGCACCAAGAGCCGTGGAAAAATGTAAAAGCAGAAGCTGA 735 0.4816 MATLLGEKHDLNLKETELCLGLPGGGGVGTDQVETPRTTGKRGFSETVDLKLNLQFKEDLSENLKNTSKEKSLLKDPAKPPAKAQVVGWPPVRSYRKNAMAQKGNSEEGNSSEKNTSSSGSPTSGGAFVKVCMDGAPYLRKVDLRMYKSYQELSDALAKMFSSFTMGEYGTQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKSRS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01444 244 ProSiteProfiles PB1 domain profile. 126 226 IPR000270 GO:0005515
Bach5g01444 244 MobiDBLite consensus disorder prediction 99 125 - -
Bach5g01444 244 Gene3D - 121 238 - -
Bach5g01444 244 SUPERFAMILY CAD & PB1 domains 117 225 - -
Bach5g01444 244 Pfam AUX/IAA family 37 235 IPR033389 -
Bach5g01444 244 MobiDBLite consensus disorder prediction 23 46 - -
Bach5g01444 244 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 231 IPR003311 GO:0005634|GO:0006355
Bach5g01444 244 MobiDBLite consensus disorder prediction 67 126 - -
Bach5g01444 244 FunFam Auxin-responsive protein 121 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01444 Bach-Chr5 11461513 11463852 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01444 102 234 B3 DNA Binding Superfamily AT4G23980 31.579 7.53e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach5g01444 AUX_IAA 9.5e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01444 K14484 - gmx:100810762 368.622