Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01406 ATGGCGGAAGCTGAGAGAGGGTCCTGTGCCACAGCTTCATCAGAAGGTGGTGCCGGTGAAGGGATATCTCTGAAAGATCAGGGTAATGAATTTTTCAAAGCAGGCAACTATCTTAAAGCAGCTGCGCTTTATACTCAAGCCATCAAGCAAGACCCTTCAAACCCCACTCTTTATAGTAATCGTGCTGCAGCATTGCTGCAATTGGATAAGCTTAATAAAGCACTTGATGATTCCGACATGACAATTAAATTAAAACCCCAATGGGAAAAGGGTCACTTCAGAAAAGGATGCATACTGGAGGCAATGAAACGATATGATGATGCCTTAGCTGCCTTTCAGGTGGCTTTGCAGTACAACCCACAAAGTCAAGAAATATCAAAAAAGATAAAGAAGATAAACCAACTGGTGAGAGATAGAAAGCGAGCTGAAGAAGTGGATAGCATGAGATCTAACATTGACATAGCGAAGCATTTAGATATGCTGAAGCCTGAACTGTCTGGGCAGTATGGATCTGAAGAATGTGAGAAAGAGATATTCTCTTTCCTCGTTGAAACCATGGAGACAGCTGTAAAATCTTGGCATGAAACATCTATAGTAGATGCTAGAGTCTACTTTCTTCTTGATAAGGAAAAGACCCAGACAGACAAGTATGCTCCAATAGTAAATATTGATAAGGCCTTTGAATCGCCACACACACATGGCAACTGCTTTTCATTTCTTAGGCAGTATGCTGAGGAGTCTTTCTCCAGAGCAGCCTGCTTAGTAGCTCCAAAAGGCATAATCGCTTATCCACAGGTTTGGAAAGGCCAAGGATCAAGGAAGTGGAGGCATGGGCAGAATGATGGTTTCTTTGTTCAATTTGAGTCTCCTTCCCTGCGAAAGCTGTGGTTTATTCCCAGTTCTAATGAAATGGGACAAACATTATGCAGGAATCCAGAGGTTTTGGACATTGGTGCTCATGAAGTTTGTCCTCGATTATTCAAAGAAAAGCTATCCAGTTCTTAG 1005 0.4219 MAEAERGSCATASSEGGAGEGISLKDQGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDSDMTIKLKPQWEKGHFRKGCILEAMKRYDDALAAFQVALQYNPQSQEISKKIKKINQLVRDRKRAEEVDSMRSNIDIAKHLDMLKPELSGQYGSEECEKEIFSFLVETMETAVKSWHETSIVDARVYFLLDKEKTQTDKYAPIVNIDKAFESPHTHGNCFSFLRQYAEESFSRAACLVAPKGIIAYPQVWKGQGSRKWRHGQNDGFFVQFESPSLRKLWFIPSSNEMGQTLCRNPEVLDIGAHEVCPRLFKEKLSSS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01406 334 ProSiteProfiles TPR repeat profile. 21 54 IPR019734 GO:0005515
Bach5g01406 334 Pfam Tetratricopeptide repeat 90 121 IPR013105 -
Bach5g01406 334 Coils Coil 125 145 - -
Bach5g01406 334 Gene3D Tetratricopeptide repeat domain 22 134 IPR011990 GO:0005515
Bach5g01406 334 PANTHER TPR REPEAT CONTAINING PROTEIN 23 329 - -
Bach5g01406 334 MobiDBLite consensus disorder prediction 1 22 - -
Bach5g01406 334 FunFam serine/threonine-protein phosphatase 5 20 134 - -
Bach5g01406 334 SMART tpr_5 55 88 IPR019734 GO:0005515
Bach5g01406 334 SMART tpr_5 89 122 IPR019734 GO:0005515
Bach5g01406 334 SMART tpr_5 21 54 IPR019734 GO:0005515
Bach5g01406 334 SUPERFAMILY TPR-like 24 132 IPR011990 GO:0005515
Bach5g01406 334 ProSiteProfiles TPR repeat profile. 89 122 IPR019734 GO:0005515
Bach5g01406 334 Pfam TPR repeat 28 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01406 Bach-Chr5 10807945 10812070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01406 24 167 U-box Gene Family AT3G07370 26.582 2.47e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01406 - - qsa:O6P43_003324 564.688