Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01376 ATTTTATAAAGTGGCACTGCCAAATCCGAAGCCAAAAATCTCTCTTTCGCTCTCGTCTTCTTGTCTGACTCTTCCGGCGATCGGTTTTGTATTTTGTTCTGCGAGGAAATTGCGTCACTGATCGGGATTCTCGAAGCGGGAATTCGGCAGTGAAGGAATTGCCGGGGGTTTCAGGCGAGGTAAGATTCTGCTTTACCGTTTACGGTTTTGGGGTTACTGGCAACGGGGGAACTTTCTGGCATTCGGATTCTTTTGCTTCAGATCTGGTAGTGTGTGCCGAGGGATTCCTGTTGATGGTGATTTAGGGTTTTTTGGGTGGGGTCATCTTTAATTTTCCGTTGAGGAATTTTTTGCGGATGAATTTTGAAGGGGAAGGTTTCAGGAGTTAGGGGTTTTGGTTTAGGTGATTCATGTAGATGGAACCGGGCATGAGACCGGGTGGCCCTTCCGGGGTTGTGATGAAGAACAGGAATTCTTCTGGTTGTTTAATTGTGAGGAAGAAGGGGGATGGATTGGTTGGTGGGGTTGGTTCTTCTAGCTCACGGAAGCTGTATGAATCGAAGAAGGTCAAGAAAAGGCCCGGTGTGCCTTTGAGTGATTCAGGATCAAGCGACGACATGCCTCCTAGTAGAAGGCTTGGTCCTGAGACTATTCGCGTCTGTAATGGTTTGACTGCTTTTGAACAGGGCATGGTAGAAGAGAGTGCAATTGCTAGAAAGAGGGATAGAATGGAGCAAATTAGGCGTAATGAGGATGGTTTGATTGATAGGAGTAGTTTGGAGGAGAGGGAAAGGAAACGGAATAAGTTGGATGTGTTTGATTTTGATGAATATGATGGTATAGAGGCCGAAAATATGCGAAGGAGGCATTTTGATGATAATGGAGTTGGGTTTGGGGGAAGAAGGTTTATGGGATCAATGCCTGCTGCTAGAAGTGGCATTGGGAGAGACTTTGAGACAGGGTCAAGTAGACACATAATTGAAAAGAGAAAAAACCCCTATAATGAGAGGGGAAGTGGCTTGTATCTGGGAGATGATATTGATCACAGCAGGTACAAAATGAACAGGGACAGAGCCCAACGGCCTCTACCATTGTTGAGAGAAAAGTTCATGGGTAATTCGGATGAATCTATTAGGGTTCAAGGGAAAAATGGTGTTTTAAAGGTGATGGTTAAGAAGAAGGTAGGTGGACCACTAGAACGCTATGATCACCATAAACCTGTGGAAAGCCGACAGAATTTGAGGACTGAGGGTACCCCTAAGAGGAATGTTCTGATCCATCCTTCATCATACTCCGAAACAAAACTTGTTGAGAAATCAGGTGTCGCTGTTAGGGCAGAGAAAAAGCAGATAGCATCTAGAAAATCATTGTCAAGTAAGGACACTAAGGGTGATGAAGGGGATTCAGAAGACAGTGACACTTCGTTGAATGTGGGACTAAAAAACAGTGGAGCTCGTAAGTCTGTGAAGAGGATGAGTTCTGAGGATGAACAGACTCCTTTGCGTGAAAAGCTCCAAACTACAAAATTGACAGAAGGAAAAGTAAGACGTGGTAGTGGCACAGAGAAACAGAAGCTGCGTGAACGGATAAGGGAAATGCTGTTGACTGCTGGTTGGACTATAGACTATCGGCCTAGAAGGAATAGAGACTACCTAGATGCAGTTTACATCAATCCAGGGGGTACAGCCTATTGGTCGATCATCAAGGCCTATGATGCACTACAAAAGAGTTTGAATGATTCTAGTAATAAGCCCATGCCCAAGGGAGATGGTTCTTCCTTTGCTCCTATCTCAGATGAGGTACTCAGTCAATTGACTAGGAAAACCCGGAAAAAGATGGAGAAAGAATTTAAGAAGACGCAAAGAGATGGTAGTGATAGTGACAGTGGAAAAGAACCTCACTTTAGAGGATCTGCAAGCAACAAACTTGATGTGGATAGTATGGATAGTGATAGCAATGAGGAAAAATTAAGCTCCTTCTTAAAGCAAGGAAGTAAATCAATGAAACATAAGATTGTTGATAATGCTGTTGCCAGTGCTAGCTCTAGAGGCCAGAACTCCGACCAGCACTCAAATGATGGCACCGAAAAACCTTTGTCTGGAAGTGACCGTCGTGTGCTACATGGAAGGAAAAGCAGAAAGCATGATAGATGTACCTTGTTAGTTCGTAGTTCTGGCAAAGGGGGGAGCTCAGACACTGATGGCTTTGTTCCTTATACAGGCAAACGTACAGTCCTTTCATGGCTGATTGACTCTGGGACAGTGCAGTTAAGCCAAAAGGTTCAATACCGCAGAAGAAAGCGAGTAATGCTGGAGGGTTGGATCACAAGAGATGGTATTCATTGTGGCTGCTGTAGTAAAATCCTCACAGTTTCAAAGTTTGAGATTCATGCTGGAAGCAAAATACGGCAACCATTCCAAAATATATATTTGGATTCGGGAGTTTCTCTTCTACAGTGCCAGATAGATGCTTGGAATAGACAAGAGGATGCTAAAAAGATTGGTTTCCATTCAGTAGACATTGATGGTGATGATCCAAATGATGATACCTGTGGTATATGTGGAGATGGTGGTAATCTTATCTGTTGTGATGGCTGTCCATCAACATTTCATCAGAACTGCTTGGATATACAGATGCTTCCGCCAGGTGACTGGCATTGTCCAAACTGTACCTGCAAATATTGTGGAATAGCCAGCAGAAGTATTAAAAAGGGAGATGATGCAACTTTATATGCACTTCGTACTTGCAAGATATGCGAGAAAAAATACCATGAGACTTGCATTAAGGAGATGGATGCCCTTCCTGTTACTCCCAATAGTTCAGTTCCTTTCTTCTGCGGAAAAGAATGCAAAGAGCTTTTTGAGCACTTGAAGAAATATCTTGGTACCAAGCATGAGCTTGAAGCAGGCTTTTCCTGGTCACTGATTCATAGAACGGATGAAGACTCAGAGGCAGCTAATAGAGGAATTTCTCAGAGGGTGGAATGCAACTCTAAGCTAGCTGTTGCACTAACTGTGATGGATGAATGCTTTTTACCTGTTATCGACCGCAGAAGTGGGATCAATTTAATTCATAATGTTATATATAATAGTGGATCAAACTTCAAACGGTTGAATTACAGTGGCTTTTACACTGCTATTTTGGAGAGGGGTGATGAGATAATGTCTGCAGCATCTATCAGGTTCCATGGGACTAAGTTAGCAGAGATGCCATTCATTGGAACTTGCCACATATATAGGCGTCAGGGGATGTGTCGGAGGCTTTTTTCTGCCATTGAATCGGCTCTCTGCACTCTCAAGGTTGAGAAATTGGTTATTCCTGCAATTGCTGAACTCGTGCACACCTGGACAACAGTTTTTGGCTTCACTCCTCTTGAGGATTCGCTTAGGCAAGAAATGAAGTCATTGAGTATGCTGGTCTTCCCTGGTATAGATATGTTACAGAAGCTGCTAGTGGGGCAAGGAAAACTTGAGGGTAACACAACCACTGCAGATGCCCCAGTGGAAAGTGGAGACAGGCTCCTTATTAAGCCTGATACTGCAAATAGATCAGATATGGATTCCTCAGCTCAGCAAGATCCTCATGGAAGTGAAGATGCTGACTCACATCCTGCTAATGGGGCAACTGAAGAAAGTAGTGATGCTTCTCACGAACTCAACAATCAACTTTTGGTTGATGAGACTATATCTTCTAAATCTCATTCTGGGAAAATGTTAATTGACTCAGCTTCCGAAAAATCTGTTTCTCCTGCTAGTACTAGTCATGGTGCAGTGGAGGACGAACATAAAGCAGTGCTGGTTTCTCCCTTAGAAGATAAATCACATTGTTCTCCAAAATGTCAAGGCACTTCTCAGAATGGTGCTTCTCTGAGTAGCGATCCATTAGAAGCACCTGATTCCCTTGAAAATCCAGCTTTGGTTGAGGGAACTGCTTGTTCTGACCCTGATTCAGTGAAAAAGCTTGTTGAATCTTGTCCCACTGCCATGAATTGTGATCCACCTGAGGTTGAGACTAATCCAGTTTTGGATTCTCAAGTGGTAGATAATGCTATGTCTTCTAAAGAGGATGATATAAATGATGTCCATGAGGCTCTTGAAGTCCTTCCTTCTTCTGGGGGTTTATCTGAAGAGAATGTTATTGATAAAAGTTCCTTGCAAATGAGATCTAATTTGAATGGTGAAGTCGCATATGAAAGAAAAAGAAAGTTAGATGATGGAACAAATGTTGTTTCTAATGGAATCGGTTCTGTTGAAAGTGGGCTCGAAGCATCTGGTGAAGTTGATAGTTCAGAGACTGATTCATTATAA 4307 0.4305 MEPGMRPGGPSGVVMKNRNSSGCLIVRKKGDGLVGGVGSSSSRKLYESKKVKKRPGVPLSDSGSSDDMPPSRRLGPETIRVCNGLTAFEQGMVEESAIARKRDRMEQIRRNEDGLIDRSSLEERERKRNKLDVFDFDEYDGIEAENMRRRHFDDNGVGFGGRRFMGSMPAARSGIGRDFETGSSRHIIEKRKNPYNERGSGLYLGDDIDHSRYKMNRDRAQRPLPLLREKFMGNSDESIRVQGKNGVLKVMVKKKVGGPLERYDHHKPVESRQNLRTEGTPKRNVLIHPSSYSETKLVEKSGVAVRAEKKQIASRKSLSSKDTKGDEGDSEDSDTSLNVGLKNSGARKSVKRMSSEDEQTPLREKLQTTKLTEGKVRRGSGTEKQKLRERIREMLLTAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKSLNDSSNKPMPKGDGSSFAPISDEVLSQLTRKTRKKMEKEFKKTQRDGSDSDSGKEPHFRGSASNKLDVDSMDSDSNEEKLSSFLKQGSKSMKHKIVDNAVASASSRGQNSDQHSNDGTEKPLSGSDRRVLHGRKSRKHDRCTLLVRSSGKGGSSDTDGFVPYTGKRTVLSWLIDSGTVQLSQKVQYRRRKRVMLEGWITRDGIHCGCCSKILTVSKFEIHAGSKIRQPFQNIYLDSGVSLLQCQIDAWNRQEDAKKIGFHSVDIDGDDPNDDTCGICGDGGNLICCDGCPSTFHQNCLDIQMLPPGDWHCPNCTCKYCGIASRSIKKGDDATLYALRTCKICEKKYHETCIKEMDALPVTPNSSVPFFCGKECKELFEHLKKYLGTKHELEAGFSWSLIHRTDEDSEAANRGISQRVECNSKLAVALTVMDECFLPVIDRRSGINLIHNVIYNSGSNFKRLNYSGFYTAILERGDEIMSAASIRFHGTKLAEMPFIGTCHIYRRQGMCRRLFSAIESALCTLKVEKLVIPAIAELVHTWTTVFGFTPLEDSLRQEMKSLSMLVFPGIDMLQKLLVGQGKLEGNTTTADAPVESGDRLLIKPDTANRSDMDSSAQQDPHGSEDADSHPANGATEESSDASHELNNQLLVDETISSKSHSGKMLIDSASEKSVSPASTSHGAVEDEHKAVLVSPLEDKSHCSPKCQGTSQNGASLSSDPLEAPDSLENPALVEGTACSDPDSVKKLVESCPTAMNCDPPEVETNPVLDSQVVDNAMSSKEDDINDVHEALEVLPSSGGLSEENVIDKSSLQMRSNLNGEVAYERKRKLDDGTNVVSNGIGSVESGLEASGEVDSSETDSL 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01376 1296 MobiDBLite consensus disorder prediction 301 331 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 278 297 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 539 557 - -
Bach5g01376 1296 PANTHER PHD FINGER PROTEIN 12 328 1158 IPR042163 GO:0003714|GO:0045892
Bach5g01376 1296 MobiDBLite consensus disorder prediction 1101 1162 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 349 385 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 1101 1115 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 259 277 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 1270 1296 - -
Bach5g01376 1296 SUPERFAMILY FYVE/PHD zinc finger 701 757 IPR011011 -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 1039 1078 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 440 524 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 537 596 - -
Bach5g01376 1296 Pfam PHD-finger 712 754 IPR019787 -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 465 500 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 1261 1296 - -
Bach5g01376 1296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 700 767 IPR013083 -
Bach5g01376 1296 SMART PHD_3 755 811 IPR001965 -
Bach5g01376 1296 SMART PHD_3 711 752 IPR001965 -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 30 76 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 259 385 - -
Bach5g01376 1296 Pfam Tify domain binding domain 634 684 IPR032308 -
Bach5g01376 1296 CDD PHD2_CHD_II 712 751 - -
Bach5g01376 1296 MobiDBLite consensus disorder prediction 1138 1154 - -
Bach5g01376 1296 ProSitePatterns Zinc finger PHD-type signature. 712 751 IPR019786 -
Bach5g01376 1296 ProSiteProfiles Zinc finger PHD-type profile. 709 754 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01376 Bach-Chr5 10516037 10523520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01376 4 1076 PHD Transcription Factor Family AT4G14920 49.310 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach5g01376 TDBD 2.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01376 - - qsa:O6P43_003370 1649.41