Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01365 ATGTTGTCTAATCATTTCCAAAACGGAATCGAAACGGCGAAGCTTGTTTGGTCGCGGATTCCCGGCTCCGATGAGTCTTCACCGTTTCTCGACGACATCCTTGACCTTTTGAAGAAGAATGATGGTAGCGGAGTTGAGAGTCTTGACTATGAAGTCATAGAGAATTATGCATATCGGGAAGAACAGGCGAAAAGAGGGAAGTTGTATGTGGGCTATTTGCTGGTGGTGAAGTGGTTCTTTGCCTTGCTCATTGGCATTGGTACCGGGCTTGCTGCTGTTTTCATCAATATCTCTGTTGAAAACTTTGCTGGCTGGAAGTTCTCATTGACGTTTGATATAATTCAGAAATCATATGTGGCTGGCTTTTTCGTATATGTCTTGATCAATTTGGCTTTAGTCTATTCCTCTGTATATATCATCACGCAATTTGCACCAGCAGCGGCTGGATCTGGTATTCCTGAAATCAAAGGTTACTTGAATGGAATTGATGTTCATGGCATCCTTCTCTTCAGAACCTTAATTGGAAAGATTTTTGGAAGCATTGGTTCAGTGGGAGGTGGCCTCGCCTTAGGAAAAGAGGGTCCTCTTGTGCACATTGGTGCTTGTATTGCTTCTTTGCTTGGACAGGGTGGATCCACCAAGTATCATTTAAGTTCAAGGTGGTTTCAAGTATTCAAAAGTGATCGAGATCGTCGTGACCTTGTAACATGTGGATGTGCAGCTGGAGTTGCAGCTGCATTTAGAGCTCCAGTTGGTGGTGTGTTGTTTGCTTTGGAAGAGGTTACATCTTGGTGGAGGAGTCAACTAATGTGGCGTGTCTTCTTCACTTCTGCTATTGTGGCCGTTATGGTGCGTACTGCTATGGGATGGTGCAAGAGTGGGAAGTGTGGACATTTTGGCTCAGGTGGATTCATTATATGGGATATATCAGGTGGTCAAGAGGATTATTCCTTTGCAGAGTTACTGCCGATGGCCATTATTGGTGTTATTGGAGGTCTACTGGGAGCCTTATTTAACCAGCTCACTCTTTATGTTTCTTCTTGGCGTCGAAATCATCTTCACAAGAAAGGGAGCCGGGTCAAGATTGTTGAAGCATGCCTTGTTTCCCTGATAACATCGGTTATTTCATTTGGCTTGCCGCTTCTGAGAAAATGTAGTCCATGCCCTGAATCCGTTCCTGATTCTAGTATTGAATGTCCACGACCTCCTGGAATGTATGGGAACTATGTAAATTTCTTTTGTAGCAATGACAAGGAATACAATGATCTTGCTACCATTTTCTTCAATACACAGGATGATGCCATAAGGAATTTGTTCAGTGCCAAAACAATAAATGAGTACAGTGCTCAGAGTTTATTAACCTTTCTGGTTATGTTTTATACTTTAGCAGTCATGACATTCGGCACTGCTGTTCCAGCTGGACAGTTTGTTCCTGGAATAATGATAGGGTCAACATATGGACGTCTTGTTGGCATGTTTGTGGTAAAATTTTACAGACGGCTCCACATTGAGGAGGGAACGTATGCTCTGCTGGGAGCAGCATCTTTTCTCGGAGGTTCAATGCGGATGACAGTCTCTCTCTGTGTCATCATGGTTGAAATCACAAATAACTTAAAACTTTTACCGCTTATTATGCTGGTCCTTCTCATATCGAAGGCTGTTGGAGATGCTTTTAATGAGGGTTTCTATGAAGAGCAAGCACGACTGAAGGGCATTCCATTACTGGAATCAAGACCTAAATATGAGATGCGGAATATGACAGCAAAGGAGGCTTGTGGGACTGAAAGGGTGGTCTCTTTCCCTCGTGTTGTCAAGGTTGCAGATGTGGTTTCCATTCTCCGAAGCAATAAACACAACGGTTTTCCTGTAATTGATCACACAAGAACTGGTGAACCACTTGTTATTGGCCATTTATTGGTAATTTTGCAGTCAAGGGTTGATTTCCAGCATAGTCCTTTACCATCTGATCCCCGAGGTGGAGCCAGACCAATAAGACATAATTTTGGTGAATTTGCAAAGCCTGCTTCTAGTAAAGGATTAAGCATAGAGGATATACATCTAAGTTCAGATGACTTGGAAATGTACATAGATCTTGCCCCATTTTTGAATCCCTCTCCATACATTGTACCGGAAGATATGTCTGTGACAAAGGTGTACAATCTTTTCCGTCAACTAGGTTTAAGGCATTTGTTCGTTGTTCCACGTCCATCTCGTGTGCTTGGTTTAATAACTAGGAAAGATTTGTTGATTGAGGACACAGAAAACTCAAATACAGTAGAGCTCCAGTCAACTAGTATCTCGGCATCGTGA 2310 0.4273 MLSNHFQNGIETAKLVWSRIPGSDESSPFLDDILDLLKKNDGSGVESLDYEVIENYAYREEQAKRGKLYVGYLLVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFDIIQKSYVAGFFVYVLINLALVYSSVYIITQFAPAAAGSGIPEIKGYLNGIDVHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHIGACIASLLGQGGSTKYHLSSRWFQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVMVRTAMGWCKSGKCGHFGSGGFIIWDISGGQEDYSFAELLPMAIIGVIGGLLGALFNQLTLYVSSWRRNHLHKKGSRVKIVEACLVSLITSVISFGLPLLRKCSPCPESVPDSSIECPRPPGMYGNYVNFFCSNDKEYNDLATIFFNTQDDAIRNLFSAKTINEYSAQSLLTFLVMFYTLAVMTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKFYRRLHIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGFYEEQARLKGIPLLESRPKYEMRNMTAKEACGTERVVSFPRVVKVADVVSILRSNKHNGFPVIDHTRTGEPLVIGHLLVILQSRVDFQHSPLPSDPRGGARPIRHNFGEFAKPASSKGLSIEDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSVTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDTENSNTVELQSTSISAS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01365 769 CDD CBS_pair_voltage-gated_CLC_euk_bac 597 749 - -
Bach5g01365 769 Pfam Voltage gated chloride channel 135 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 SUPERFAMILY Clc chloride channel 55 577 IPR014743 -
Bach5g01365 769 SUPERFAMILY CBS-domain pair 580 749 IPR046342 -
Bach5g01365 769 FunFam Chloride channel ClC3 69 386 - -
Bach5g01365 769 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 40 754 - -
Bach5g01365 769 PRINTS Chloride channel signature 240 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 PRINTS Chloride channel signature 524 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 PRINTS Chloride channel signature 506 522 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 PRINTS Chloride channel signature 471 491 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 PRINTS Chloride channel signature 562 576 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 PRINTS Chloride channel signature 145 162 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach5g01365 769 FunFam Chloride channel protein 662 751 - -
Bach5g01365 769 Gene3D - 594 750 IPR046342 -
Bach5g01365 769 Gene3D Clc chloride channel 71 576 - -
Bach5g01365 769 SMART cbs_1 705 753 IPR000644 -
Bach5g01365 769 SMART cbs_1 596 643 IPR000644 -
Bach5g01365 769 Pfam CBS domain 703 749 IPR000644 -
Bach5g01365 769 CDD ClC_6_like 46 575 - -
Bach5g01365 769 ProSiteProfiles CBS domain profile. 702 759 IPR000644 -
Bach5g01365 769 PRINTS Plant CLC chloride channel signature 51 59 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach5g01365 769 PRINTS Plant CLC chloride channel signature 423 439 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach5g01365 769 PRINTS Plant CLC chloride channel signature 293 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach5g01365 769 PRINTS Plant CLC chloride channel signature 261 269 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach5g01365 769 PRINTS Plant CLC chloride channel signature 275 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01365 Bach-Chr5 10391054 10399174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01365 1 765 Ion Channels AT5G26240 84.565 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01365 K05016 - gmx:100811908 1363.21