Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01361 ATGGATCTACAGAGGCGCCAAGATCAGAGCGTCCCTGAGAGGAAAGGGCAGAAGCGGAAGCTGGAGGAGGGATACGAAGAGGAGCGAGAGATCTCGGCTACGCCACCCACTGGCGACGCTCGGGAGGCGCTGCTCGCCGAGGTGAGTGCGCAGGTTGATGTCCTCGACTCCACTTTCTCTTGGAAGGAAACCGATCGAGCCGCGGCTAAGCGCGCCACTCACGTCCTTGCCGAGCTTGCTAAGAATGAGGAAGTAGTGAACGTGATTGTTGAAGGAGGCGCAATTCCGGCGTTGGTCAAGCATCTGCAAGCGCCGCCTTTGAGTGAAAATGATCATAGTCAGAAGCCATTTGAGCACGAGGTTGAGAAAGGGAGTGCTTTTGCTCTAGGCCTTCTTGCCGTCAAGCCAGAACATCAACAATTAATAGTCAATAATGGTGCATTAAAATATCTTGTTGATCTCTTAAAGAGGCATAAGAGTTGTTCTACTTCTCGTGCTGTGAATAGTGTCATTCGTAGGGCTGCAGACGCGGTCACTAATCTTGTACATGAGAACAGCAGCATTAAAACCCGTGTCAGGATGGAAGGTGGGATTCCGCCCCTTGTTGATTTGCTTGAATTTACTGATACAAAGGTGCAAAGAGCTGCTGCTGGTGCACTGCGAACCCTGGCTTTTAAAAATGATGAGAATAAAAATCAGATTGTTGAATGCAATGCTTTACCAACACTCATTCTAATGCTTCGATCAGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTAGTTCACTCTTCCCCTAATATAAAGAAAGAGGTTCTTCATGCTGGTGCTTTACAACCTGTCATTGGTTTACTTAGCTCCTGCTGCTCTGAGAGCCAAAGGGAAGCTGCCTTGTTACTTGGACAGTTTGCCGCAACTGATTCAGACTGTAAGGTTCACATTGTGCAGAGGGGTGCTGTCCGACCTCTGATAGACATGCTTCAGTCCCCTGATGTACAACTCAGAGAAATGTCTGCCTTTGCTTTGGGGAGATTAGCACAGGATACACATAATCAAGCTGGTATTGCACACAATGGTGGCTTAGTGCCATTACTGAAACTTCTCGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCCCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGTGTTCAGAGACTGCAGGATGGAGAGTTTATTGTTCAAGCCACAAAAGACTGTGTTGCAAAGACATTGAAAAGATTAGAGGAGAAGATTCATGGTCGTGTCCTGAACCATTTATTATATCTTATGCGAGTTTCAGAAAAAGCTGTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTCTGCGGATGATCAGAGGACCATATTCATTGATAATGGCGGTTTAGAGTTGCTCATTGGGCTTCTTGGCTCTTCTAGCCCTAAGCAACAACTTGATGGTGCTGTGGCTTTATGCAAGTTGGCCAACAAAGCCATGACTCTATCTCCCATAGATGCTGCTCCGCCTTCACCAACACCACAGGTCTATTTGGGAGAGCAGTACGTAAACAGTGCTACGTTGTCTGATGTTATATTTTTAGTTGAAGGCAAACGCTTTTATGCTCACAGAATCTGCCTGCTTGCTTCATCTGATGCATTCCGGGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCTAGGGATATAGAGATTCCAAATATCAGATGGGAGGTTTTCGAGCTGATGATGAGATTCATTTATACCGGATCAGTAGATATTACCCTGGATATTGCCCAAGATCTCCTCCGAGCAGCTGATCAATATCTCTTAGAAGGACTTAAGCGTCTCTGTGAGTACACTATTGAACAGGATATATCACTGGTGAATGTGTCAAGTATGTATGAACTTTCAGAAGCCTTCAATGCAATATCATTAAGGCACACCTGCATCCTTTTTATCTTGGAGCAATTTGATAAATTGAGTGCCAGACCAGGGCATTCTCATTTGATTCAGCGTATAATACCAGAGATCCGCAATTACTTTACCAAGACACTTACAAAGGCTAACACTCGTGACTTCCGGTTGTAGTATGCGGCTATTCTATTCTTGACATCTAACCAATTGTGATGTACAGCATATGTCGAACAAGGAAGGGAGTCTTCTTCACTGAGTTTTGGCATGGCAAATTTCTGACACCAGAGCCATGCATGTTGCTTTCTGAGGCAGTGTAAGTCCCCTCTATGTATTTGTTATAGATATATTGAATATGACCTTCACAAACAGTCTATTCTCACAATTTTTGTGATGGTTATATGAGTAGGCAATTACCCCTCGTGATTGATTTTTGGGTTCAGGCAATTATGAGTCCTTTTGTCTGATGATAGGCTTGAGGTTTCTCTAAGCACGTATTTGTATATATGACAATCAGATAGATTTCTATGCAAGAAAATTATGCTATTAGATAATATATCTATACA 2510 0.4382 MDLQRRQDQSVPERKGQKRKLEEGYEEEREISATPPTGDAREALLAEVSAQVDVLDSTFSWKETDRAAAKRATHVLAELAKNEEVVNVIVEGGAIPALVKHLQAPPLSENDHSQKPFEHEVEKGSAFALGLLAVKPEHQQLIVNNGALKYLVDLLKRHKSCSTSRAVNSVIRRAADAVTNLVHENSSIKTRVRMEGGIPPLVDLLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLHAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIDMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKAVQRRVALALAHLCSADDQRTIFIDNGGLELLIGLLGSSSPKQQLDGAVALCKLANKAMTLSPIDAAPPSPTPQVYLGEQYVNSATLSDVIFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDITLDIAQDLLRAADQYLLEGLKRLCEYTIEQDISLVNVSSMYELSEAFNAISLRHTCILFILEQFDKLSARPGHSHLIQRIIPEIRNYFTKTLTKANTRDFRL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01361 706 Gene3D Potassium Channel Kv1.1; Chain A 522 665 IPR011333 -
Bach5g01361 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 238 280 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 135 183 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 311 351 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 269 309 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 352 392 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 467 507 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 227 267 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 82 134 IPR000225 GO:0005515
Bach5g01361 706 SMART arm_5 185 225 IPR000225 GO:0005515
Bach5g01361 706 SMART BTB_4 539 636 IPR000210 GO:0005515
Bach5g01361 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 363 405 IPR000225 GO:0005515
Bach5g01361 706 SUPERFAMILY POZ domain 531 633 IPR011333 -
Bach5g01361 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 196 231 IPR000225 GO:0005515
Bach5g01361 706 Gene3D - 351 411 IPR011989 -
Bach5g01361 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 196 IPR000225 GO:0005515
Bach5g01361 706 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 700 IPR044282 -
Bach5g01361 706 Gene3D - 48 350 IPR011989 -
Bach5g01361 706 SUPERFAMILY ARM repeat 169 507 IPR016024 -
Bach5g01361 706 MobiDBLite consensus disorder prediction 1 38 - -
Bach5g01361 706 ProSiteProfiles BTB domain profile. 539 606 IPR000210 GO:0005515
Bach5g01361 706 Pfam Armadillo/beta-catenin-like repeat 227 266 IPR000225 GO:0005515
Bach5g01361 706 Pfam Armadillo/beta-catenin-like repeat 192 224 IPR000225 GO:0005515
Bach5g01361 706 Pfam Armadillo/beta-catenin-like repeat 311 350 IPR000225 GO:0005515
Bach5g01361 706 SUPERFAMILY ARM repeat 65 158 IPR016024 -
Bach5g01361 706 Pfam BTB/POZ domain 532 634 IPR000210 GO:0005515
Bach5g01361 706 CDD BTB_POZ_ARIA_plant 526 641 - -
Bach5g01361 706 Gene3D - 413 521 IPR011989 -
Bach5g01361 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 93 147 IPR000225 GO:0005515
Bach5g01361 706 MobiDBLite consensus disorder prediction 1 35 - -
Bach5g01361 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 322 364 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01361 Bach-Chr5 10329947 10336719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01361 185 391 U-box Gene Family AT5G67340 29.327 6.21e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bach5g01361 BTB 9.6e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01361 - - vvi:100249437 1229.54