Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01351 TATTTGTTAAATATAAGGGACCGTTGCCACGCTCCCGCCATGGTCATGCCTCAGCTCGACTCCATCGACCATGCCCAGAAGACCAAGACACTTATTTGTGCTCTCAACCTTGTTTCCCGCGACCTCCCTCTCCCTCCTGACCTCTTTCACACCGTTTCTTCGATCTATCATGGCGCCCAAGGCGCTAATACTGATGCCCAACAATGTGGAGTTCGTGATGACAGTATCGGTGCTGCTGGATCTGATGAGAGAGCCGTGGATATGGATGCCCAGATGGGTTTGGATGGCATAGGGAATTCTAGAGTAGATTTATTAACAGAGTTTGAAGATGCATTATTGAAGCAACGCCAAATTTGTCTGTCAGGTTTTAAATTGAAGGAAACATGGGAAAACCGTCTCCAAAGTCGGATTCAGCATCGGTTGAATGAGCTTGAAGAGTTGCCTTCAAGCAGGGGAGAAGATCTGCAGACAAAGTGCCTGCTTGAACTGTATGGACTAAAGCTAGCAGAGTTGCAGAGGAAGGTCAGGTCTGAAGTAAGTTCTGAATACTGGCTCAATGTTAAATGTGCGTTTCCTGATAAGCAATTATTTGATTGGGGAATGATGCGGTTGCACCGTCCAATGTATGGTGTTGGAGATCCATTCTCCATGGATGCTGACGATCAACTAAGGAAGAAAAGGGATGCTGAGAGACTATCAAAGTTAGAAGAGGAGGAAAAGAATCATATAGAAACCAGAAAAAGAAAATTTTTTGCAGAAATACTGAATGCTGTCCGCGAGTTCCAATTACAACTTCAAGCTTCTTTGAAACGGAGAAAACAGAGGAATGATGGCATCCAGGCTTGGCATGGAAGGCAAAGACAACGTGCAACACGGGCAGAGAAATTGAGATTCCAAGCCTTAAAGGCTGATGATCAAGAAGCATACATGAGAATGGTGAAAGAGAGCAAGAATGAAAGACTGACTTTGCTTCTGGAAGAAACAAATAAACTACTTGTAAATTTGGGAGCAGCTGTTCAACGTCAAAGGGACTCAAAACATTTGGATGGCATTGAACCCTTGGATGATTCTGAAGCTGATTTACCAGAGTCAGAAGCTTCAAAGAATGGGATTTCTAAAGAATCTCCTTCTGAGGAAGATATGGATGTTACTGATTCTGATCAAAACGGTGATGATAGTGATTTACTTGCAGGTCAGAGGCAATACAACTCTGCCATCCATTCAATTCAAGAAAAGGTAACTGAGCAGCCATCTTGTCTTCAAGGTGGAGAATTAAGACCATACCAGATAGAAGGGCTCCAGTGGATGCTTTCTTTGTTTAATAACAATCTAAATGGTATTTTGGCTGATGAAATGGGGCTGGGGAAGACAATACAAACCATTTCATTGATAGCATATCTTATGGAGTATAAGGGTGTGACTGGTCCCCACTTGATTGTGGCTCCAAAGGCTGTTCTGCCAAATTGGATCATTGAGTTCTCAACATGGGTTCCTAGCATTACAACTGTTCTTTATGATGGACGGTTGGACGAGAGGAAGGCAATGAAGGAAGAATTGTCCGGGGAGGGAAAATTTAATGTTCTGATAACACACTATGATCTTATTATGAGGGATAAAGCATTTCTAAAGAAAATTCACTGGCACTACTTAATTGTAGATGAAGGGCATAGATTGAAGAATCATGAGTGTGCTCTGGCAAGAACCCTAGACTCCAGCTATCAGATCCAACGCAGACTCCTGTTGACTGGAACTCCAATTCAAAATAGTTTACAGGAATTGTGGTCCCTGCTTAATTTTCTGCTTCCAAACATTTTTAATTCAGTTCAAAATTTCGAGGACTGGTTTAATGCCCCCTTTGCAGATCGAGTTGATGTCTCTCTAACAGACGAAGAACAACTACTGATCATTCGTCGTTTGCACCAAGTAATAAGGCCCTTCATCTTAAGAAGGAAAAAAGATGAGGTGGAAAAATATCTTCCTGGGAAATCTCAGGTCATACTCAAATGTGATATGTCAGCTTGGCAGAAAGTATATTATCAACAAGTTACTGACTTGGGCAGAGTTGGATTAGATAATGGTACCGGGAAATCGAAAAGCCTGCAGAATTTAACGATGCAACTGAGAAAGTGTTGTAACCATCCATACCTCTTTGTGGGAGACTACAGTAATATGTGGAATAAGGACGAGATTATCAGAGCATCAGGGAAGTTTGAACTTCTTGACCGCTTGCTCCCTAAACTTCGAAGAGCTGGGCACAGAGTCCTTCTCTTCTCACAAATGACTCGTCTCATGGACATTCTTGAAGTTTATCTGCGGATGCATGATTACTGTTTTATGAGACTTGATGGCTCAACAAAAACTGAGGAAAGAGGATCTCTACTACGGAAATTCAATGCTCCTGATTCTCCATACTTTATGTTTCTCTTGAGCACCCGTGCTGGAGGTCTTGGTTTGAACTTACAAACAGCAGATACTGTTATAATCTTTGATAGTGATTGGAACCCTCAAATGGATCAACAAGCTGAGGATCGTGCTCATCGTATTGGGCAAAAGAAGGAAGTTAGGGTTTTTGTGTTGGTTAGTGTGGGATCAATAGAAGAGGTGATTTTGGAGCGAGCAAAACAAAAGATGGGCATTGATGCCAAAGTCATCCAAGCAGGACTTTTCAACACAACTTCAACTGCTCAGGATAGAAGAGAGATGTTGGAGGAGATTATGCGTAGAGGTACGAGATCTCTTGGGGCAGATGTACCAAGCGAGAGAGAAATCAACCGGCTCGCTGCTCGATCAGACGAGGAATTTTGGCTATTTGAGAAAATGGATGAAGAGAGAAGGCAAAGGGAGAACTACCGGTCTCGCCTGATGGAAGAGCATGAAGTGCCCGAGTGGGTTTACTCTGCACCTAGTAAGGATGACAAGCCCAAAGGTTTCGACAGTGCTGGTGTTACTGGAAAGCGAAAAAGAAAAGATGTGGCATATTCTGATAACTTGAGTGAGCTGCAATTTATGAAGGCTGTGGAGAATGGGGACATGCCAAGCATTCTAAATAAGGGGAAAAGAAGAGACCGTACACCGTCAGACAGTGTGGGAACAGAGGAAAGGTTACCAGAGTTAAGGAATCACAGGGCCCCTGTCCCCATGGAAGATGAGAGAACAAGTGCAGATAGCTTCCATATCACTCCATCCCCAAAGAGATTCAAGCCTGAAGTAACAAACATCCACTCCCAGAGACATGACTCCCGTGAGCCTGAGGGTGTAAGTGGGGGTGGTTTGAATGAGCGTGTGTTTTCCTGGAATACCCACAGAAAGAAGAGATCAAGCTATCTTGCCCAGGGTTCCTTGTCTGATTCTAGAGGACAGAATTCAAATGGAAGATCAAATTGGAGCTGATTCTATCTTAAGTCCATTCATGGGTGCCAGTACTTTATGCGTTTAGCCCTGGGAGTTGATTGGAGCAGTACGTGGTTGACACTCAATCACGATAAATGATCAATCCACCAAAATTCATTATGGTTTTGTAAGATGATGAGCATTTATATAAAATTCATCAATCTATGAAATATATTTCCAAGGTTCATTTAGGATGTTTGAGAAATGAAACCCCACGTGTTATTCGTTTTGACATGTACCATGCAATGTAAACAATTTACGTTGAAG 3657 0.4269 MVMPQLDSIDHAQKTKTLICALNLVSRDLPLPPDLFHTVSSIYHGAQGANTDAQQCGVRDDSIGAAGSDERAVDMDAQMGLDGIGNSRVDLLTEFEDALLKQRQICLSGFKLKETWENRLQSRIQHRLNELEELPSSRGEDLQTKCLLELYGLKLAELQRKVRSEVSSEYWLNVKCAFPDKQLFDWGMMRLHRPMYGVGDPFSMDADDQLRKKRDAERLSKLEEEEKNHIETRKRKFFAEILNAVREFQLQLQASLKRRKQRNDGIQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTLLLEETNKLLVNLGAAVQRQRDSKHLDGIEPLDDSEADLPESEASKNGISKESPSEEDMDVTDSDQNGDDSDLLAGQRQYNSAIHSIQEKVTEQPSCLQGGELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLMEYKGVTGPHLIVAPKAVLPNWIIEFSTWVPSITTVLYDGRLDERKAMKEELSGEGKFNVLITHYDLIMRDKAFLKKIHWHYLIVDEGHRLKNHECALARTLDSSYQIQRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDLGRVGLDNGTGKSKSLQNLTMQLRKCCNHPYLFVGDYSNMWNKDEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEVYLRMHDYCFMRLDGSTKTEERGSLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGTRSLGADVPSEREINRLAARSDEEFWLFEKMDEERRQRENYRSRLMEEHEVPEWVYSAPSKDDKPKGFDSAGVTGKRKRKDVAYSDNLSELQFMKAVENGDMPSILNKGKRRDRTPSDSVGTEERLPELRNHRAPVPMEDERTSADSFHITPSPKRFKPEVTNIHSQRHDSREPEGVSGGGLNERVFSWNTHRKKRSSYLAQGSLSDSRGQNSNGRSNWS 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01351 1116 FunFam Chromatin structure-remodeling complex protein SYD 403 646 - -
Bach5g01351 1116 Gene3D - 382 636 IPR038718 -
Bach5g01351 1116 Coils Coil 206 226 - -
Bach5g01351 1116 PANTHER SNF2/RAD54 HELICASE FAMILY 204 1014 - -
Bach5g01351 1116 SMART SnAC_2 929 990 IPR029295 GO:0042393
Bach5g01351 1116 Pfam SNF2-related domain 415 703 IPR000330 GO:0005524|GO:0140658
Bach5g01351 1116 SMART helicmild6 752 836 IPR001650 -
Bach5g01351 1116 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 424 590 IPR014001 -
Bach5g01351 1116 MobiDBLite consensus disorder prediction 953 974 - -
Bach5g01351 1116 MobiDBLite consensus disorder prediction 1089 1116 - -
Bach5g01351 1116 MobiDBLite consensus disorder prediction 1001 1042 - -
Bach5g01351 1116 Coils Coil 927 947 - -
Bach5g01351 1116 CDD SF2_C_SNF 714 847 - -
Bach5g01351 1116 Pfam Snf2-ATP coupling, chromatin remodelling complex 929 990 IPR029295 GO:0042393
Bach5g01351 1116 MobiDBLite consensus disorder prediction 998 1116 - -
Bach5g01351 1116 MobiDBLite consensus disorder prediction 1057 1071 - -
Bach5g01351 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 890 IPR027417 -
Bach5g01351 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 637 IPR027417 -
Bach5g01351 1116 SMART ultradead3 408 601 IPR014001 -
Bach5g01351 1116 Pfam Helicase conserved C-terminal domain 723 836 IPR001650 -
Bach5g01351 1116 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 726 893 IPR001650 -
Bach5g01351 1116 MobiDBLite consensus disorder prediction 329 382 - -
Bach5g01351 1116 Gene3D - 643 942 IPR027417 -
Bach5g01351 1116 FunFam Probable ATP-dependent DNA helicase CHR12 643 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01351 Bach-Chr5 10211137 10219591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01351 698 864 RAD5 or RAD16-like Gene Family AT5G43530 33.918 1.85e-20 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach5g01351 SNF2_N 1.9e-68 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01351 - - pcin:129308606 1824.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01351 5 10211137 10219591 Bach7g01130 7 22093361 22093903 BWGD