Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01345 ATGTACTCACAGCTCAATCGAGTTCACTTCCTCTTTGTTCCAACAGTGTTGGTTCTACTGTCTTTTTTTGTGCCTCGTACTAGCTTTGCTGTGGTTGAAGTCCTCAACATTAACACAGACCGGTCTTCTCTTCTTGCCCTCAGAGACCATATCACTCATGACCCCAATAATTTCCTTGCCAACAACTGGTCCATTAAAGCCCCTGTTTGCAATTGGTTTGGCATCACTTGTGGTTCTTCCCACCTTAGAGTTACCGCCCTCAATCTCTCCAACATTGGCCTTGTTGGCACCATTCCTCCCCATATTGGAAACTTGTCCTTCATTACCATGTTAGTTCTTGATAACAATAGCTTTCAGGGTTCCCTTCCTAGTGAATTGGCTCGGTTGCATAGATTGAAACTAATTAGCCTATCCTTCAACAACTTAGATGGGGAGATTCCATCATGGTTTGTTTTCTTACAAAAAATTGAAAAGTTGTGGTTAGACCATAATAGTTTCACAGGTCATATACCATCATCCTTATTCAACATTACTTCACTGCAAGGACTTGATCTTCAATATAATAAATTTAGGGGTTTGCTACCCTCCAACTTTTTCCAAGCCTCTGCCCTACAATTTGTAAATATTAATAGTAACCAAATCTCAGGTTCTATCCCAAGCACTGTTGCCAATATATCATCACTGCAAACTATTGATCTTGGCTACAACAACTTGTCAGGTGAAGTCCCAGAAAGTATCTTCTACTGTCTTCCTAAATTGCAACGATTTAGCTTATACGGTAACCAGTTCTCTGGAGGAATACCATATAGTTTATTTAGTTGCAAGCAGCTGCAAAGTTTGGTCTTAGCGCGCAATAGTTTCGAAGGAAATATACCAAGAGAGATTGGAAATCTGACTATGCTTCGTACACTGTATCTTGACTCCAACAAATTAAAAGGGATTGCCACAGTCCTTATATTGATTTTCTTATATGAGCTCAAACGGAAGAAGCAAAACAAGCCATTCAATGCAGAGGAAGAACCAACAGTGACAACATGGAGAAGAATTTCATACCATGAACTTCAGGAAGCTACAAATCAGTTCAATGATGCAAATCTACTCGGTACTGGGAGCTTTGGAAAAGTATACAAAGAAATACTTACCGATGGGAACAATGTCCCAGTGAAAGTTTTCAATTTGAAGCTTGAAGGAGGATTTAGAAGCTTTGATTCTGAATGCGAAGTATTAAGAAATGCTCGTCGTCATCGAAATCTTATAAAAATCATTAGCAGTTGTAGTAATGATATTGACTTCAAGGCATTGATTTTGAGTTACATGCCTAATGGGAGTTTGGAGAGGTGGTTATATTCAGAGAATTTTTGTTTGAGTATACCTCAAAGGATGAATATAATGATCCATGTTGCAGCAGCATTGGATTATCTACATCATGATTGTTTTATACCAATTGTGCATTGTGATCTGAAACCTAGTAACATATTGTTGGATCAAGATATGGTTGCACATGTGACTGATTTTGGCATTGCAAAACTCTTGGGTGGAGATTCCATCACACATACAATGACACTAGCAACAATTGGGTATACGGCTCCAGAATATGGATTGCAAGGAATTGTTTCTAGGCAAGGTGATGTATATAGCTATGGTATTTTGCTTATGGAAACCTTCATTGGAAAGAAGCCCACAGATGAAATGTTCCATGGAGAATTTAGCATCAGGCATGCTTCTTCCTATGGTAGGTCCCAATTGGAGGTGCATACAAGTGGCGATGAACAATATCAACAACAGTGGGATCAAGAAAGTATACATCAGTTCAACTTAGCAACCCTCAACAAGAATATTTCCCGTGCTTACAGCACTGTCACCTTTGGAGATGGCTACGTGAAGGTATTGCAGATGCTGTGCGCCAGTTTCCATTTGCTCTTTGAGGTACAACACTACACCAGCTAA 1947 0.3945 MYSQLNRVHFLFVPTVLVLLSFFVPRTSFAVVEVLNINTDRSSLLALRDHITHDPNNFLANNWSIKAPVCNWFGITCGSSHLRVTALNLSNIGLVGTIPPHIGNLSFITMLVLDNNSFQGSLPSELARLHRLKLISLSFNNLDGEIPSWFVFLQKIEKLWLDHNSFTGHIPSSLFNITSLQGLDLQYNKFRGLLPSNFFQASALQFVNINSNQISGSIPSTVANISSLQTIDLGYNNLSGEVPESIFYCLPKLQRFSLYGNQFSGGIPYSLFSCKQLQSLVLARNSFEGNIPREIGNLTMLRTLYLDSNKLKGIATVLILIFLYELKRKKQNKPFNAEEEPTVTTWRRISYHELQEATNQFNDANLLGTGSFGKVYKEILTDGNNVPVKVFNLKLEGGFRSFDSECEVLRNARRHRNLIKIISSCSNDIDFKALILSYMPNGSLERWLYSENFCLSIPQRMNIMIHVAAALDYLHHDCFIPIVHCDLKPSNILLDQDMVAHVTDFGIAKLLGGDSITHTMTLATIGYTAPEYGLQGIVSRQGDVYSYGILLMETFIGKKPTDEMFHGEFSIRHASSYGRSQLEVHTSGDEQYQQQWDQESIHQFNLATLNKNISRAYSTVTFGDGYVKVLQMLCASFHLLFEVQHYTS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01345 648 SUPERFAMILY L domain-like 40 317 - -
Bach5g01345 648 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 171 250 - -
Bach5g01345 648 SMART LRR_typ_2 298 321 IPR003591 -
Bach5g01345 648 SMART LRR_typ_2 177 201 IPR003591 -
Bach5g01345 648 SMART LRR_typ_2 250 274 IPR003591 -
Bach5g01345 648 SMART LRR_typ_2 225 249 IPR003591 -
Bach5g01345 648 FunFam Os07g0541700 protein 439 527 - -
Bach5g01345 648 Gene3D Phosphorylase Kinase; domain 1 331 438 - -
Bach5g01345 648 FunFam Serine-threonine protein kinase plant-type 341 438 - -
Bach5g01345 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Bach5g01345 648 Gene3D Ribonuclease Inhibitor 154 246 IPR032675 -
Bach5g01345 648 FunFam Leucine-rich repeat receptor-like kinase 41 151 - -
Bach5g01345 648 Gene3D Ribonuclease Inhibitor 39 153 IPR032675 -
Bach5g01345 648 Gene3D Ribonuclease Inhibitor 247 326 IPR032675 -
Bach5g01345 648 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Bach5g01345 648 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Bach5g01345 648 Pfam Protein kinase domain 362 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g01345 648 SUPERFAMILY Protein kinase-like (PK-like) 342 578 IPR011009 -
Bach5g01345 648 PANTHER OS04G0122200 PROTEIN 250 313 - -
Bach5g01345 648 SMART serkin_6 361 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g01345 648 Gene3D Transferase(Phosphotransferase) domain 1 439 616 - -
Bach5g01345 648 ProSiteProfiles Protein kinase domain profile. 361 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g01345 648 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01345 Bach-Chr5 10136576 10141260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01345 83 582 Receptor kinase-like Gene Family AT3G47570 36.535 3.99e-103 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach5g01345 Pkinase 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01345 - K13420 qsa:O6P43_012812 452.981