LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g01340	ATGGTGATCATGAATTCCCAGCTCAATGGAGTTCACTTGCTCTCTGTTCCAACTGTGTTGGTTCTGCTTTGCTGTTTTATGGCTCCTACTACTATTGCTGCAGCTGGAGTCTTCAACATTAACACCGACCAATCTTCTCTTCTTGCCTTCAAAGACCATATCACGCATGACCCCAATGATATCCTTGCCAAAAACTGGTCTATTAAAACCCCTGTTTGCAACTGGATTGGGATCACTTGTGGTTCTTCCCACCTTAGAGTTACAGCTGTCAATCTCTCCTACATGGGCCTCGTTGGTACCATTCCTCCTCATATTGGAAACTTGTCCTTCGTTACCATGTTAGATCTTCGTAACAATAGCTTTCACGATTCTCTTCCTAGTGATTTGGCCCGGTTATGTAGATTGAAAATAATCAGCCTAACCTTCAACAATTTCAGTGGAGAGATTCCCTCATGGTTTGTCTTGTTACCAAAAATTGAAGAGTTGTGGTTAGGCCATAACAGTTTCATGGGTCATATCACACCCTCCTTGTTCAACATTACTTCGCTGCAGTCACTTGACCTTAGAATGAACAAACTTTCAGGTTTACTACCCTCCAATTTCTTCCAAGCCCCTGCACTACAATTTGTAAGCATTCATGGTAATCAAATCTCCGGCTCTATTCCAAGCAAGGTTTCCAATATTTCATCACTGCAAACTGTTAGTTTTGGCAACAACAGCCTTTCTGGTGAAGTCCCAAAAAATATTTTCTATTACCTTCCTCAATTGCAACGCTTGAGCATATACATCAACCAGTTTTCTGGAAAAATTCCTCCCAGTCTGTTTAGTTGCAAGAAGCTGCAAATTGTGCTCTTAGGAAATAACTGTTTCAAGGGAGGTATACCAAGAGAGATTGGGAATTTGACAATGCTTGAAGAGTTGTATCTTTCTCAGAACAAATTGCAAGTGGGGGTTGGCACAATCCTTATTCTAATTTTCGTATATGTGCACAAACGGAGAATACAGAGTAAGCCATTCAAAGCGGAGGAAGACTCAACAGTGACAACGTGGAGAAGAATTTCATACCTTGAACTTCAACAAGCTACTAATCAGTTCAGTGATGTTAATTTACTTGGTACTGGGAGCTTTGGGAAAGTATATAAAGCAATCCTTGCTGATGGAATCACTGTTGCAGTAAAAGTTTTCAATGTTGAGCTTGAAGGAGGAATTAGAAGCTTTGACTCTGAATGTGAAGTATTACGAAATGTCCGTCATCGAAATCTTACAAAAATCATTAGCAGTTGTAGTAATGATATCGACTTCAGGGCATTAATTTCAAGTTACATGCCTAATGGAAGTTTAGAGAGGAGGTTATATTCTGACAATTATTGTTTGAGTATAATTCAAAGGATGGATATAATGATTGATGTTGCTGCTGCACTAGATTATCTACATCATGGTTGCTCTATACCAATTGTTCATTCTGATCTAAAACCTAGTAACATATTGCTAGATCAAGACATGGTTGCACATGTGACTGATTTTGGCATTGCCAAATTCTTGGGTGAACGTTCCTTCACACATACTATGACACTAGCCACAATGGGGTATATGGCTCCAGAGTATGGATTGGAAGGAATCATTTCTAGGCAAGGTGATGTATATAGCTATGGTATTTTGCTTATGGAAACCTTCACTGGAAAGAAGCCTACAGATGAAATGTTCAATGGAGAATTTAGCATCAAGCATTGGGTGAAAGATTCATACCCTAATACAATAAGTGATATTACTAGTGGCCAACTATTGACAGAAGGCAGAAGAGAATTAGATGTTAAGAAGGAGTGCTTATTACCACTCATGGCGTTAGCATTGGATTGCACAGCAGATTCTCCATATGAAAGGGGAAATATAAAAGATGTCTTAGCAGCACTCAAGAAGATCAGAGTCAAGTTTCTGAATGAAACTGGAAGTCCTAGAGTATCTGTTTGA	1968	0.3933	MVIMNSQLNGVHLLSVPTVLVLLCCFMAPTTIAAAGVFNINTDQSSLLAFKDHITHDPNDILAKNWSIKTPVCNWIGITCGSSHLRVTAVNLSYMGLVGTIPPHIGNLSFVTMLDLRNNSFHDSLPSDLARLCRLKIISLTFNNFSGEIPSWFVLLPKIEELWLGHNSFMGHITPSLFNITSLQSLDLRMNKLSGLLPSNFFQAPALQFVSIHGNQISGSIPSKVSNISSLQTVSFGNNSLSGEVPKNIFYYLPQLQRLSIYINQFSGKIPPSLFSCKKLQIVLLGNNCFKGGIPREIGNLTMLEELYLSQNKLQVGVGTILILIFVYVHKRRIQSKPFKAEEDSTVTTWRRISYLELQQATNQFSDVNLLGTGSFGKVYKAILADGITVAVKVFNVELEGGIRSFDSECEVLRNVRHRNLTKIISSCSNDIDFRALISSYMPNGSLERRLYSDNYCLSIIQRMDIMIDVAAALDYLHHGCSIPIVHSDLKPSNILLDQDMVAHVTDFGIAKFLGERSFTHTMTLATMGYMAPEYGLEGIISRQGDVYSYGILLMETFTGKKPTDEMFNGEFSIKHWVKDSYPNTISDITSGQLLTEGRRELDVKKECLLPLMALALDCTADSPYERGNIKDVLAALKKIRVKFLNETGSPRVSV	655

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g01340	655	Pfam	Leucine rich repeat N-terminal domain	41	80	IPR013210	-
	Bach5g01340	655	ProSiteProfiles	Protein kinase domain profile.	365	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g01340	655	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	485	497	IPR008271	GO:0004672\|GO:0006468
	Bach5g01340	655	Pfam	Protein kinase domain	366	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g01340	655	Gene3D	Ribonuclease Inhibitor	249	327	IPR032675	-
	Bach5g01340	655	Gene3D	Transferase(Phosphotransferase) domain 1	442	649	-	-
	Bach5g01340	655	SUPERFAMILY	L domain-like	42	316	-	-
	Bach5g01340	655	ProSitePatterns	Protein kinases ATP-binding region signature.	371	393	IPR017441	GO:0005524
	Bach5g01340	655	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	442	650	-	-
	Bach5g01340	655	FunFam	Leucine-rich repeat receptor protein kinase EMS1	173	273	-	-
	Bach5g01340	655	Gene3D	Ribonuclease Inhibitor	42	154	IPR032675	-
	Bach5g01340	655	SUPERFAMILY	Protein kinase-like (PK-like)	346	637	IPR011009	-
	Bach5g01340	655	Gene3D	Ribonuclease Inhibitor	155	248	IPR032675	-
	Bach5g01340	655	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	207	315	-	-
	Bach5g01340	655	SMART	serkin_6	365	642	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g01340	655	Gene3D	Phosphorylase Kinase; domain 1	335	441	-	-
	Bach5g01340	655	FunFam	Serine-threonine protein kinase plant-type	345	441	-	-
	Bach5g01340	655	FunFam	Leucine-rich repeat receptor-like kinase	43	157	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g01340	Bach-Chr5	10075484	10079218	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g01340	86	652	Receptor kinase-like Gene Family	AT3G47090	34.568	8.04e-108	347

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Bach5g01340		Pkinase	8.3e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g01340	-		K13420	aew:130770417	520.005