Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01337 ATGGAAATTTTCACCTCCTCCTCTTCTTCACCAGCTCCATTTCATTCTGACATGCTATCTTTTGCAGCTGGATCGTCTTCTGCAGCATTTGACGACGACGCCGAGGACTCCTGTAGTATTTGTCTTGAGCCTTTCAGCACTGATGACCCAGCCATTGTTACCAGTTGCAAGCATGAGTATCATCTGCATTGCATTCTTGAATGGTCTCAGAGAAGCAAAGAGTGCCCAATATGTTGGCAGGTACTTGTCTTGAAAGATCCTGGCAGCCAAGAGCTTCTAGGTACAGTGGAGGCTGAGAAGCGCTTAAGATCAAGAAACATATATTTGCCCGCATCCACTAATTCTAGGAGCTCCCTTGAATTACTTAATGTTGACCCTACTTATTCAGATGACTCTAATTTTTATGAACAGATTATGCAGCGCCTAGTTGCGGCTGCACGTAGAGCTCGTTTTTATCGCAGAAGGGAAAGGCAGAGATCATCTGGAGCTGGCCTTTCAGAGGTTCTTCTTTCTAACTCCTCTTCTAATGTCTCCGCAGTGCAACCTACGTTTACAACTTCACCATCTGGAGGTAGTTCACCAGCTTCTGATGTACCATCTACTGGTAACATTCAACATTCACCGTCTGCTTTCTCCCCAGCTGTTGAAGCTGTTGCGAGAAATACCACTCCTGAGAATGACGTCCCTTTCAGACCCAGAGTTCTTTATGGCCAATTGCCATCTGAGAGTGTGAGGAGGCAAAATGCCTCTGAGGTGTTCTCCTTGCCTGAGTCCATCAAGTCCAAACTTTCTGCTGCTTCAGCCAAATACAAGGAATCAATTGCAAAAAGCACTCGTGGCCTTAAAGAGAAGTTACTTGCTCGTAACACCTCAGTCAAAGAGCTGAGTAAAAGTTTTCAGCGTGAGATGAATGCAGGCCTTGCCAGTGTTGCACGAATGATTGAACGCTTTGATCTTACTTCAAAACGGTCTTCCACTTCTCCTCTCATTCCGAGCTTCCCCTTGAAAGGGAAGACTGTCCAAGCAAATGGTGCCATGGTTCATGAAGATAGTGGTGCTGTGGTTCGTGATGTTAACTCAAATTCACCTTCTCTTGTTCCCAGCATGGTTGCTGATCAATTATAA 1125 0.4542 MEIFTSSSSSPAPFHSDMLSFAAGSSSAAFDDDAEDSCSICLEPFSTDDPAIVTSCKHEYHLHCILEWSQRSKECPICWQVLVLKDPGSQELLGTVEAEKRLRSRNIYLPASTNSRSSLELLNVDPTYSDDSNFYEQIMQRLVAAARRARFYRRRERQRSSGAGLSEVLLSNSSSNVSAVQPTFTTSPSGGSSPASDVPSTGNIQHSPSAFSPAVEAVARNTTPENDVPFRPRVLYGQLPSESVRRQNASEVFSLPESIKSKLSAASAKYKESIAKSTRGLKEKLLARNTSVKELSKSFQREMNAGLASVARMIERFDLTSKRSSTSPLIPSFPLKGKTVQANGAMVHEDSGAVVRDVNSNSPSLVPSMVADQL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01337 374 ProSiteProfiles Zinc finger RING-type profile. 38 78 IPR001841 -
Bach5g01337 374 SUPERFAMILY RING/U-box 33 85 - -
Bach5g01337 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 90 IPR013083 -
Bach5g01337 374 SMART ring_2 38 78 IPR001841 -
Bach5g01337 374 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 26 87 - -
Bach5g01337 374 FunFam E3 ubiquitin-protein ligase RHF1A 23 90 - -
Bach5g01337 374 MobiDBLite consensus disorder prediction 177 209 - -
Bach5g01337 374 Pfam Ring finger domain 36 78 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01337 Bach-Chr5 10033063 10035285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01337 32 86 C3H Transcription Factor Family AT4G00335 47.273 2.45e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01337 K19043 - qsa:O6P43_021605 382.874