Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01316 ATGTCTCACATAGTCGTTGAGAGGAAAAGGAGAAGACAGATGAATGAACATCTCAAAGTCTTAAGGTCCTTCACCCCATCTTTCTATATCAAAAGGGGAGATCAAGCATCTATAATAGGGGGTGTAATAGAATTCATCAAGGAGTTGTGCCAAGTTCTTCAAGCTTTGGAGTCCAAGAAACGAAGGAAGAGTTTGAGCCCTAGCCCTGGCCTCAGCCCTAGTACTCCAAGAACACTCGTGCAGCCAGCCCTACAACTTGATAACCCCTTTGGAATTGGATCTGAGCACTCTTTTAAGGAACTAGGAACAAGTTGCAACTCTTCAGTTGCGGACGTGGAAGTGCAAATCTCAGGGCCAAACGTGATTCTGAAAGTGATTTCTCACAGAATTCCGGGTCAAGTTGCTAAGATAATAACTGTTTTGGAAAGGCTTTCATTTGAAGTCCTTCATCTGAACATCAGTAGCACGGAGGATACAGTTCTTCATCACTTTGTTGTCAAGATAGGGTTGGAATGTCAACTGAGTCTGGAAGAACTAGCAATGGAAGTACAAAAGAGCTTCTTCCCAGATGCTGTTAGTGCTATCGAGATATAG 594 0.4327 MSHIVVERKRRRQMNEHLKVLRSFTPSFYIKRGDQASIIGGVIEFIKELCQVLQALESKKRRKSLSPSPGLSPSTPRTLVQPALQLDNPFGIGSEHSFKELGTSCNSSVADVEVQISGPNVILKVISHRIPGQVAKIITVLERLSFEVLHLNISSTEDTVLHHFVVKIGLECQLSLEELAMEVQKSFFPDAVSAIEI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01316 197 PANTHER TRANSCRIPTION FACTOR FAMA 1 187 IPR044283 GO:0003700|GO:0010052
Bach5g01316 197 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Bach5g01316 197 SMART finulus 4 55 IPR011598 GO:0046983
Bach5g01316 197 Gene3D - 1 64 IPR036638 GO:0046983
Bach5g01316 197 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Bach5g01316 197 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 67 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01316 Bach-Chr5 9709584 9711366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01316 1 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 63.054 2.52e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g01316 HLH 2.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01316 - - qsa:O6P43_003430 260.381