Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01314 ATGGGGATTTCGTGGAGTGGCAGAAGAAGAACCAATTACCTTCAAAACCCACCACCACCTCATCTGCCACCCCCTTACTATTACTCTTCAAATTCTCATTCTCACCATCCTCCTCTTCCGCCGCCACAAGGTTACTTTTTTACCTCAACAGCCCCTTATACTCATCACAACAATAGCCATGTCACTCCCCCTCCTCTGCCACCGCCACCACCACCACCTCCACCTCCACCTGCTGAAACCCATTCATTCTATTACTCAAATGGGTACAGCAACTCTGCCAACTTTGCTAATCATATGGTGGGTCGGCTTCATTACCACCCCTATTATGCAAATCAGCCAAATGGGTGGCCTGCAATTCGTCCTCCTGTCGCTCCGGTTCAAACCCCACCACCTTACGTTGATCATCAAACTGCGAAGAAGATAAAGAACGATGTCAATGTCCATAAAGATACGTTGCGGCTTGAGGTCGATGAGCTCAATCCTGATCATCACTTGGTGTCATTTGTTTTTGATGCCATATATGACGGGAGCATTACCATCTTCTACTTTGCCAAGGAAGAAGAAAAATGTAGGTTTGTTCCATTGTATCCTGATGCATCTGAGCCAGTTACAATCCCCTTTGAGAAAGGAGTTGGCCAAAAGTTTATTCAGCCTTCAGGAACAGGCATTGACTTGGGCTTCTTTGAGTTGGATGATCTCTCAAAACCATCACCTGGAGAACAGGTGTTCCCCCTTGTAATATGTGCTGAAACAAAAACTCCAGCAGATGAAAACCTTGGTGATTCCATGCTAGATGTATCTCCTCACATGCAGATTACTCAAGCTGTTCTAGAGAAAAGTAATGGTGCTGGTCCTTTCCAGGTGAAAGTAGTTAGGCAAATTTTGTGGGTTGATGGGGTTCGTTATGAGTTAAGAGAGATATATGGAATAGGAAGCTCATCGGAATCAAATTTTGAAGACAACGAACCTGGGAAGGAGTGTGTAATATGCATGACTGAGCCGAAGGATACTGCTGTTTTACCTTGTCGACATATGTGTATGTGCAGTGAGTGTGCACAAGCTCTGAGGCATCAATCGAATAAATGCCCTATATGCCGTCAGCCTATTGAAGAACTTATGGAGATCAAGATAAATAATAGCAATCAATGA 1149 0.4447 MGISWSGRRRTNYLQNPPPPHLPPPYYYSSNSHSHHPPLPPPQGYFFTSTAPYTHHNNSHVTPPPLPPPPPPPPPPPAETHSFYYSNGYSNSANFANHMVGRLHYHPYYANQPNGWPAIRPPVAPVQTPPPYVDHQTAKKIKNDVNVHKDTLRLEVDELNPDHHLVSFVFDAIYDGSITIFYFAKEEEKCRFVPLYPDASEPVTIPFEKGVGQKFIQPSGTGIDLGFFELDDLSKPSPGEQVFPLVICAETKTPADENLGDSMLDVSPHMQITQAVLEKSNGAGPFQVKVVRQILWVDGVRYELREIYGIGSSSESNFEDNEPGKECVICMTEPKDTAVLPCRHMCMCSECAQALRHQSNKCPICRQPIEELMEIKINNSNQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01314 382 PANTHER MAHOGUNIN 33 377 IPR045194 GO:0061630
Bach5g01314 382 Pfam Zinc finger, C3HC4 type (RING finger) 325 371 - -
Bach5g01314 382 MobiDBLite consensus disorder prediction 61 80 - -
Bach5g01314 382 FunFam probable E3 ubiquitin-protein ligase LOG2 311 376 - -
Bach5g01314 382 ProSiteProfiles Zinc finger RING-type profile. 327 366 IPR001841 -
Bach5g01314 382 SUPERFAMILY RING/U-box 321 372 - -
Bach5g01314 382 CDD mRING-HC-C3HC5_MGRN1-like 325 366 IPR045195 -
Bach5g01314 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 311 376 IPR013083 -
Bach5g01314 382 SMART ring_2 327 365 IPR001841 -
Bach5g01314 382 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01314 Bach-Chr5 9668255 9672095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01314 71 382 C3H Transcription Factor Family AT3G06140 54.630 3.41e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01314 - - qsa:O6P43_021626 537.339