Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01276 ATGGGTAATTGTTGGCTAGTTATCTTGGCGTATTTTGATTTGTTTTTAGCATCTTTAGCTCATTTGTACTTTCTGACATTATCTGTTCCTTTCGGAAATGAAGATTCTGTTGGCAGTAAAAATTTCCACGATTTAGATACAGAGGACAAAGAAGAAAAGCAGAAGGACAAAGGAGAAACGCATAAGGACAAAGAAGGAAAACTGGACAAAGGAGAAAAGCACAATGACAAGGACGAAAAGCATAAGGACGAAGAAGAAAAGCAGACAAGTTCTTTGAGAAGCAGAGCAACAAGAGCTGGGTTTTCTGATTCATTTTTAAGCATTGACTTGGGATCTTTAGACATTGACGGGCAGGTTGCAGCTGAGTGCTCTCCTAGAGGGGTGCTGGAAGACTGCTCAAGTAGTTTAGAATCTGAAGCATCTTCTGCCAATCCCTGTACTTCTGGTGTAGAGGGTCAGCCAGATTCAAGAGGCAATCCTCAGTCGCGTGGTCTCTTTCGGTTACTGAAGAAAGGATCCCAAATGCGCTTCCAAAACTTTCATCCACTCAAAAATGTTCCAAAACTCACCAGAAGAAAAAGTAAAAAACTTAGGGAGGACTTGATTCCAGCACGGCAACCAACTTTTGACGCTGATCATCTTTGCTACTTCAAATCTTCCTGGAAAAATTTCTCTCTTTCAGAGATCCAAGCTGCAACGAACGACTTCAGTAATGAAAATTTGATTGGGGAGGGAGGTTATGCCGAAGTTTACTTAGGAAAATTAGAAGATGGGCAATTTGTTGCAATCAAACGGCTAACAAGAGGAAATCCAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCACGTGGACCATCCCAATATTGCCAAATTGATTGGATATGGTGTTGAAGGGGGAATGTTCCTTGTTCTTCAATTGTCTCCACACGGAAGCCTATCATCCATACTTTATGGACCTCGAGAGAGACTGAACTGGAGGATCAGATATAAAATTGCTTTGGGGACTGCTGAGGGCCTTTGCTATCTGCACGAGGGATGTCAAAGAAGGATTATTCACAAAGATATCAAGGCTGCTAATATACTACTCATGGAGGATTTTGGGCCTCAGATATCTGATTTTGGCCTTGCAAAGTGGTTACCTGACCAATGGAGTCATCATATTGTCTCCAAAGTTGAAGGCACATTTGGCTACCTTCCTCCCGAATTCTTCATGCATGGTATAGTAGATGAAAAGACTGATGTATACGCTTATGGAGTGCTGTTGTTGGAGCTTATTTCTGGACGACAAGCGATTGATAGCTCTCAGAAAAGTCTGGTGATGTGGGCGAAACCATTGTTATCTGATAATAAAATCAAAGAGATAGTTGATCCATGTCTGGCTGATGCTTATGATGAGGGAGAGATGAGTCGTCTAGTCTTGACAGCTTCAGCTTGTGTAGATCAATCTGCAAGTGAACGACCACAAATGAACCAGGCATGTGATGAAGAATACTTGAACCTCATGAAAGAACACCAGAAGTCGTCCAGACTACAGAGGACATACTCTGAAGAGCTCTTTGATGCAGAGGAGTACAACTCAACCAAGCTTTTGCAAGACCCAGATCAACTTATGGAGATTATTCTAAGCTCCTGCAACTCTATGAAAGCAGAAAGCATTGAAGACTAG 1680 0.419 MGNCWLVILAYFDLFLASLAHLYFLTLSVPFGNEDSVGSKNFHDLDTEDKEEKQKDKGETHKDKEGKLDKGEKHNDKDEKHKDEEEKQTSSLRSRATRAGFSDSFLSIDLGSLDIDGQVAAECSPRGVLEDCSSSLESEASSANPCTSGVEGQPDSRGNPQSRGLFRLLKKGSQMRFQNFHPLKNVPKLTRRKSKKLREDLIPARQPTFDADHLCYFKSSWKNFSLSEIQAATNDFSNENLIGEGGYAEVYLGKLEDGQFVAIKRLTRGNPEEMTADFLSELGIIVHVDHPNIAKLIGYGVEGGMFLVLQLSPHGSLSSILYGPRERLNWRIRYKIALGTAEGLCYLHEGCQRRIIHKDIKAANILLMEDFGPQISDFGLAKWLPDQWSHHIVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELISGRQAIDSSQKSLVMWAKPLLSDNKIKEIVDPCLADAYDEGEMSRLVLTASACVDQSASERPQMNQACDEEYLNLMKEHQKSSRLQRTYSEELFDAEEYNSTKLLQDPDQLMEIILSSCNSMKAESIED 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01276 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Bach5g01276 559 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
Bach5g01276 559 MobiDBLite consensus disorder prediction 134 160 - -
Bach5g01276 559 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 206 310 - -
Bach5g01276 559 SUPERFAMILY Protein kinase-like (PK-like) 213 501 IPR011009 -
Bach5g01276 559 MobiDBLite consensus disorder prediction 39 92 - -
Bach5g01276 559 Gene3D Phosphorylase Kinase; domain 1 210 310 - -
Bach5g01276 559 Gene3D Transferase(Phosphotransferase) domain 1 313 532 - -
Bach5g01276 559 MobiDBLite consensus disorder prediction 39 95 - -
Bach5g01276 559 MobiDBLite consensus disorder prediction 134 163 - -
Bach5g01276 559 PANTHER OS08G0249100 PROTEIN 81 530 IPR046958 -
Bach5g01276 559 Pfam Protein tyrosine and serine/threonine kinase 239 496 IPR001245 GO:0004672|GO:0006468
Bach5g01276 559 SMART serkin_6 236 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g01276 559 ProSiteProfiles Protein kinase domain profile. 236 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g01276 559 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 313 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01276 Bach-Chr5 9334884 9337527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01276 220 528 Trihelix Transcription Factor Family AT5G38560 41.250 6.25e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bach5g01276 PK_Tyr_Ser-Thr 7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01276 - - qsa:O6P43_003486 677.552