Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01269 ATGGAACCCTTTTCTTCCCCTTCTCCTTCACCATCTTCATCTTCACCTCCAATCCTTGCTCATCGACCAGGGAGTTCGGAAATGGAGGTGCAACCGCGTTTCGCCGAAGACCCTTCATCAGCTTGGGATTTGGATTACCTTATAGATTTCAACTTAGATGATCAACTGGATGTCTCCTTAGACTGCGATCAAAATTCAGAACTTCCTGAAACATTGGAACTACCTCCACAACCGCAAGTAGCTCCAGCTGCAGAAAAGGTCCGCAAGCGAGACCCCAGGTTGACTTGCTCTAATTTTCTTGCGGGTCAGGTCCCATGTGCATGCCCGGAAATCGACGAGAAGCTTGAGGAAGAAGGTTTACCTGGTAAGAAACGGCCTCGCACTATGCGTGCATCGGCTGGGATTGCACGGTGCCAGGTACCTGGTTGCGAGGCAGATATTGGTGAGCTAAAAGGGTATCATAAGAGGCATAGGGTTTGTTTGCGGTGTGCAAATGCTAGTACGGTAATGCTTAATGGGGAGGAGAAGAGATACTGTCAACAGTGTGGAAAGTTTCACATATTATCAGATTTTGATGAAGGTAAAAGAAGCTGTAGAAGAAAATTAGAGCACCATAACAATCGAAGGCGAAGAAAGCCTACTGATTCCAGAGCTGCTGCAGGAAATGATCGTCAATCTTATATGCAGACTGACGCTGCCAAATTTGACAGTGAAATAGGAAAAGGAGCTCCACTGGAGCATGAAGATGGCCAAATTACAACTCGATGTTCAGCTCCTGTTACCCAGAATATCAATATTGATAGTGGTGTATCTTTTGTTGCTTCTGGTGTAACACAAGTGAATGGTGGAAAAGATAATTTTGATTTTTCTCGTTCACTGTCATATTGCAACCACAAGAGTGCTTACTCATCTATGTGCCCTACAGGTCGGATCTCTTTCAAGCTTTATGATTGGAATCCAGCAGAGTTTCCCAGAAGGCTACGGCACCAAATATTCCAATGGTTGGCCAGTATGCCTGTTGAGCTGGAAGGATATATTCGCCCTGGATGTACAATCCTGACAGCTTTTATTGCAATGCCAAAGTTTATGTGGATAAATTTACTTGAAGATCCTGTGGACTATGTGCGTGATCTTGTTGTTCCAGGAAAGATGCTATCTGGAAGGGGCAACATGCAAGTTCACCTGAATGATACGATCTTCCGAGTGATGGAAGATGGATCTTCTGTAGTGAAAGTTGAGTTAAAGGTGAAGGCACCAAGGCTTCACTATGTTCATCCCACATACTTTGAAGCTGGCAAACCTATGGAGTTTATTGCATGTGGAAGTAATTTGTTGCAGCCTAAGTTTCGGCTTCTTGTATCTTTTTCCGGGGGGTATCTAAAGTCTGAGTATTGTGTTGCATCTCCACATAAATCATCTGAAGGCAACATTTCTTGTGCTTTTGAACATCAGTCATACAGAATAAGTATCCCTCAAACAGAACCAAATCTCTTTGGGCCTGCATATATTGAGGTGGAGAATGAATCTGGTTTGTCAAACGTTATTCCTGTACTCATTGGGGACAAAGAAATTTGCCTTGAAATTAAGGCATTGCAGCAGAGATTAGATGCATCTTTCCTTTCTAAACAACTTAAATCTGCATCTGCTGGTTCTATCTGCAGCTCGTGCAGAGCATCAGTACTGAGACACACAGCATATTCTGACTTACTTTCAGATATATCTTGGCTGCTTAAGGATCCTACTTTAAAAAAATTTCATAGAGCTATGACAGCTTCACAAGTTCAAAGATTCTGTTATTTGTTGGACTTTCTGATATTCAATGATTCTGCCACCATTTTGCGGAAAATATTACAGAATTTGAAGACTTTGACAGAAAACTTGGAGTCAAGTAACACAATTAATGGGATGAGTAATGATGATTTGTTGCTATTGCAGAAATGCATGAAGCATGCTAGAGGTGTTCTTGATCAGAAAAATCAGAAAGGTGGATGTTTACTCATGTACTCTGAAATGAAACAACGTACAGTTGCTGAAAGCTCCTTCCAATTTAATATATCGTCTACTGTTCCAATCAGCAGTCAGGGTATTGAGGTAAGACCAGATTCCAAGTTGGGCGTACTGAGAAGTCCAAATTGTAATGAAAGAAGTGAAAGGATACCTCTTCTGAAAAGGGAGATTATAATGAACATAGACTCTTCAAAGCAGTTTCCTAGAAGATCGGGTCATCGATATCTTGCTAGGGGAGTCATGAAATCTCGGCCAGCCATCTTTATGGTTGCTTCGTTTGCTCTATGTATTGGGGTATGCGCAGTCCTCCTCCATCCTGGGAAGGTTGGTGAATTTGCAGTATCCATTAGAAGGTGCTTATTTAACCAATAATAGATGTTCCAAGTTTTGGCTTCTGAATTCTTGGCTGGTATATATTTGTTGTACACTAAATAAAGAGACGTTGATTTTTGGATAAATAGTTGGTTCCTAATATTGGAATGATCATGGCTGCTAATTTTGCTGCTCTGATCTAATCATAAGTCCCAAAAGGACTTTTGCTGTTACTTGTGACTGGGAGGAGTGGGTTTATATAATAGGTTAAAATTTTGAAGTTCAC 2605 0.4146 MEPFSSPSPSPSSSSPPILAHRPGSSEMEVQPRFAEDPSSAWDLDYLIDFNLDDQLDVSLDCDQNSELPETLELPPQPQVAPAAEKVRKRDPRLTCSNFLAGQVPCACPEIDEKLEEEGLPGKKRPRTMRASAGIARCQVPGCEADIGELKGYHKRHRVCLRCANASTVMLNGEEKRYCQQCGKFHILSDFDEGKRSCRRKLEHHNNRRRRKPTDSRAAAGNDRQSYMQTDAAKFDSEIGKGAPLEHEDGQITTRCSAPVTQNINIDSGVSFVASGVTQVNGGKDNFDFSRSLSYCNHKSAYSSMCPTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTAFIAMPKFMWINLLEDPVDYVRDLVVPGKMLSGRGNMQVHLNDTIFRVMEDGSSVVKVELKVKAPRLHYVHPTYFEAGKPMEFIACGSNLLQPKFRLLVSFSGGYLKSEYCVASPHKSSEGNISCAFEHQSYRISIPQTEPNLFGPAYIEVENESGLSNVIPVLIGDKEICLEIKALQQRLDASFLSKQLKSASAGSICSSCRASVLRHTAYSDLLSDISWLLKDPTLKKFHRAMTASQVQRFCYLLDFLIFNDSATILRKILQNLKTLTENLESSNTINGMSNDDLLLLQKCMKHARGVLDQKNQKGGCLLMYSEMKQRTVAESSFQFNISSTVPISSQGIEVRPDSKLGVLRSPNCNERSERIPLLKREIIMNIDSSKQFPRRSGHRYLARGVMKSRPAIFMVASFALCIGVCAVLLHPGKVGEFAVSIRRCLFNQ 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01269 792 SUPERFAMILY SBT domain 136 216 IPR036893 GO:0003677|GO:0005634
Bach5g01269 792 MobiDBLite consensus disorder prediction 1 36 - -
Bach5g01269 792 Gene3D - 134 199 IPR036893 GO:0003677|GO:0005634
Bach5g01269 792 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 12 600 IPR044817 GO:0003677
Bach5g01269 792 MobiDBLite consensus disorder prediction 1 16 - -
Bach5g01269 792 MobiDBLite consensus disorder prediction 202 226 - -
Bach5g01269 792 ProSiteProfiles Zinc finger SBP-type profile. 135 212 IPR004333 GO:0003677
Bach5g01269 792 Pfam SBP domain 138 212 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01269 Bach-Chr5 9286442 9292859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01269 27 786 SBP-box Gene Family AT5G18830 46.384 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach5g01269 SBP 3.4e-27 No_clan